Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Mir7075-201ENSMUST00000184187 82 ntBASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Phf7-203ENSMUST00000226565 1971 ntBASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx6-2D3Z4R4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Gm8493-201ENSMUST00000196881 489 ntBASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nkx6-2D3Z4R4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nkx6-2D3Z4R4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nkx6-2D3Z4R4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms