Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Gm22697-201ENSMUST00000175194 63 ntBASIC17.66■□□□□ 0.42
Trim30cD3YVI9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim30cD3YVI9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Gm18101-201ENSMUST00000215769 548 ntBASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim30cD3YVI9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trim30cD3YVI9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trim30cD3YVI9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim30cD3YVI9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Gm7213-201ENSMUST00000215977 950 ntBASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim30cD3YVI9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.63■□□□□ 0.41
Trim30cD3YVI9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Gm6659-201ENSMUST00000174752 547 ntBASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Mir1668-201ENSMUST00000184114 107 ntBASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim30cD3YVI9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms