Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Gm2274-201ENSMUST00000184539 609 ntBASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Asic1-205ENSMUST00000228185 1818 ntBASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Gm29257-201ENSMUST00000186115 639 ntBASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav12-1A0N8R1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Gm7213-201ENSMUST00000215977 950 ntBASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 App-207ENSMUST00000227737 2827 ntBASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav12-1A0N8R1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Gm10812-201ENSMUST00000099864 546 ntBASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav12-1A0N8R1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav12-1A0N8R1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav12-1A0N8R1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav12-1A0N8R1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav12-1A0N8R1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms