Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cfap99A0A140LIX9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Gm25925-201ENSMUST00000158314 306 ntBASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cfap99A0A140LIX9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cfap99A0A140LIX9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Gm27525-201ENSMUST00000184465 107 ntBASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.22■□□□□ 0.67
Cfap99A0A140LIX9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cfap99A0A140LIX9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms