Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm18669-201ENSMUST00000216049 778 ntBASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13n-4A0A0G2JG01 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm11950-201ENSMUST00000121615 838 ntBASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm26039-201ENSMUST00000158152 144 ntBASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm28033-201ENSMUST00000184224 96 ntBASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm7153-201ENSMUST00000117092 455 ntBASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm18958-201ENSMUST00000174258 762 ntBASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav13n-4A0A0G2JG01 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms