Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Dio3-201ENSMUST00000097228 1449 ntBASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Mtag2-201ENSMUST00000058665 714 ntBASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms