Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm36967-201ENSMUST00000193814 266 ntBASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv30A0A0B4J1P1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm27704-201ENSMUST00000185094 107 ntBASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv30A0A0B4J1P1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms