Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.39■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Mir5131-201ENSMUST00000175426 93 ntBASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm2651-201ENSMUST00000203560 838 ntBASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm18733-201ENSMUST00000173950 856 ntBASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm27646-201ENSMUST00000183989 110 ntBASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv5-43A0A0B4J1J2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms