Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm15165-201ENSMUST00000118140 502 ntBASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm12895-201ENSMUST00000122214 226 ntBASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm6257-201ENSMUST00000163864 910 ntBASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm9172-201ENSMUST00000212092 954 ntBASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.21□□□□□ -0.13
Trbv12-1A0A0B4J1H0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-1A0A0B4J1H0 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms