Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv3A0A0A6YYE2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv3A0A0A6YYE2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.46□□□□□ -0.42
Trbv3A0A0A6YYE2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv3A0A0A6YYE2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv3A0A0A6YYE2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv3A0A0A6YYE2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.46□□□□□ -0.42
Trbv3A0A0A6YYE2 BC037039-201ENSMUST00000192003 2205 ntBASIC12.46□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.46□□□□□ -0.42
Trbv3A0A0A6YYE2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trbv3A0A0A6YYE2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv3A0A0A6YYE2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Trbv3A0A0A6YYE2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv3A0A0A6YYE2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trbv3A0A0A6YYE2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trbv3A0A0A6YYE2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms