Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ighv1-23A0A0A6YVW3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm27011-201ENSMUST00000182352 972 ntBASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm715-201ENSMUST00000117865 831 ntBASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm13186-201ENSMUST00000118031 316 ntBASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm13181-201ENSMUST00000120117 1069 ntBASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Odf3b-204ENSMUST00000227834 930 ntBASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 AC112142.1-201ENSMUST00000228796 918 ntBASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ighv1-23A0A0A6YVW3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms