Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm38027-201ENSMUST00000192315 235 ntBASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13-4-dv7A0A075B6C2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm5643-201ENSMUST00000117081 966 ntBASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm12527-201ENSMUST00000117967 564 ntBASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Gm10698-201ENSMUST00000182663 604 ntBASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav13-4-dv7A0A075B6C2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms