Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 AA414768-201ENSMUST00000121924 1257 ntBASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm23634-201ENSMUST00000175071 91 ntBASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-7A0A075B6B0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm18032-201ENSMUST00000222541 538 ntBASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Il3ra-202ENSMUST00000223589 738 ntBASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-7A0A075B6B0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-7A0A075B6B0 Gm7367-201ENSMUST00000057611 492 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms