Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9d-1A0A075B699 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Gm10566-201ENSMUST00000086739 996 ntBASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav9d-1A0A075B699 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Gm18115-201ENSMUST00000221209 621 ntBASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Trav9d-1A0A075B699 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav9d-1A0A075B699 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9d-1A0A075B699 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav9d-1A0A075B699 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms