Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav8-1A0A075B641 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Gm7514-201ENSMUST00000209475 934 ntBASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav8-1A0A075B641 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 AC099934.2-201ENSMUST00000196389 70 ntBASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 AC156953.1-201ENSMUST00000196953 70 ntBASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 AC157822.2-201ENSMUST00000200291 70 ntBASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav8-1A0A075B641 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms