Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm3375-201ENSMUST00000203929 796 ntBASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav6-1A0A075B5Z8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm27463-201ENSMUST00000183569 57 ntBASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav6-1A0A075B5Z8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav6-1A0A075B5Z8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-1A0A075B5Z8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-1A0A075B5Z8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trav6-1A0A075B5Z8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-1A0A075B5Z8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-1A0A075B5Z8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-1A0A075B5Z8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trav6-1A0A075B5Z8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-1A0A075B5Z8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-1A0A075B5Z8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav6-1A0A075B5Z8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav6-1A0A075B5Z8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms