Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv4A0A075B5I2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Gm11950-201ENSMUST00000121615 838 ntBASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.19■□□□□ 0.18
Trbv4A0A075B5I2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv4A0A075B5I2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Gm25016-201ENSMUST00000158399 131 ntBASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Gm6659-201ENSMUST00000174752 547 ntBASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Gm23634-201ENSMUST00000175071 91 ntBASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv4A0A075B5I2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trbv4A0A075B5I2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trbv4A0A075B5I2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms