Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 U4.7-201ENST00000638126 106 ntBASIC0.6□□□□□ -2.31
TMEM56-RWDD3S4R434 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TMEM56-RWDD3S4R434 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 MTND4P16-201ENST00000466108 1367 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 RNU6-1080P-201ENST00000383982 107 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 EEF1A1P40-201ENST00000412883 573 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 CYCSP33-201ENST00000414485 327 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 C1DP2-201ENST00000418167 426 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 AL590135.1-201ENST00000422215 156 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 AC019205.3-201ENST00000424573 156 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 MTND5P15-201ENST00000434246 349 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 AC243964.1-201ENST00000441814 261 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 AC016700.2-201ENST00000446011 156 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 AC007395.1-201ENST00000451333 677 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 MTND1P12-201ENST00000455231 147 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 AC015911.1-201ENST00000495111 156 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 AC108729.3-201ENST00000513484 108 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 RNU6-113P-201ENST00000516653 101 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 AP001893.2-201ENST00000526949 202 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 ZNF321P-202ENST00000550843 495 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 MIR5697-201ENST00000578045 78 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 VN1R107P-201ENST00000601784 209 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 AL139022.2-201ENST00000606934 443 ntBASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.59□□□□□ -2.31
TMEM56-RWDD3S4R434 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.59□□□□□ -2.32
TMEM56-RWDD3S4R434 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.59□□□□□ -2.32
TMEM56-RWDD3S4R434 SNORD56.2-201ENST00000363242 71 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 RNU6-105P-201ENST00000363909 104 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 Y_RNA.595-201ENST00000410403 105 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 MTATP6P20-201ENST00000414147 562 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 AC114482.1-201ENST00000418010 247 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 RPS3AP37-201ENST00000419176 745 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 Z82205.1-201ENST00000428456 297 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 HMGN1P7-201ENST00000491722 313 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 RNU5F-4P-201ENST00000516581 114 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 RNU6-197P-201ENST00000516680 100 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 AC022616.6-201ENST00000520479 119 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 MIR3973-201ENST00000579824 107 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 MIR5692A1-201ENST00000580523 69 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 MIR4769-201ENST00000584126 77 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 MTCO2P2-201ENST00000591258 225 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 AC080013.3-201ENST00000606839 578 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 AC008147.4-201ENST00000617570 1204 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 AC126177.8-201ENST00000618339 1015 ntBASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.58□□□□□ -2.32
TMEM56-RWDD3S4R434 MTND4P14-201ENST00000435799 1354 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 RNU4-56P-201ENST00000364700 142 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 SNORA18.2-201ENST00000383865 132 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 RNU6-1257P-201ENST00000384625 110 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 MIR608-201ENST00000384820 100 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 RNA5SP201-201ENST00000410316 124 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 RNA5SP111-201ENST00000411386 101 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 AC244670.1-201ENST00000436879 112 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 MTND3P1-201ENST00000441336 220 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 RNU7-34P-201ENST00000459394 64 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 SNORD124-201ENST00000459577 104 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 PDCD5P2-201ENST00000507570 312 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 TRMT112P2-201ENST00000512910 132 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 AC092451.2-201ENST00000538746 658 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 AC008751.2-201ENST00000597885 980 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 AC108706.1-201ENST00000611053 297 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 AL157786.1-207ENST00000627771 695 ntBASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.57□□□□□ -2.32
TMEM56-RWDD3S4R434 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 RNU6-1123P-201ENST00000362347 106 ntBASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 U3.9-201ENST00000363823 204 ntBASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 RNU6-1141P-201ENST00000364520 107 ntBASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 SNORD114-24-201ENST00000365029 72 ntBASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 RNU6-43P-201ENST00000384302 107 ntBASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 HIGD1AP15-201ENST00000416198 280 ntBASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 AC004941.2-201ENST00000427009 228 ntBASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 AC010975.2-201ENST00000427781 588 ntBASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 CALM2P2-201ENST00000428512 440 ntBASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 AC016550.1-201ENST00000505348 785 ntBASIC0.56□□□□□ -2.32
TMEM56-RWDD3S4R434 MTND3P25-201ENST00000509243 135 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms