Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
YIPF1Q9Y548 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
YIPF1Q9Y548 AC080100.1-201ENST00000624239 5356 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
YIPF1Q9Y548 MIR521-1-201ENST00000384902 87 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 MIR517A-201ENST00000385001 87 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 AL513475.1-201ENST00000406602 315 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.44□□□□□ -2.02
YIPF1Q9Y548 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.44□□□□□ -2.02
YIPF1Q9Y548 DPH3P2-201ENST00000422618 250 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.44□□□□□ -2.02
YIPF1Q9Y548 RPS15AP7-201ENST00000439294 405 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
YIPF1Q9Y548 SNRPEP8-201ENST00000442866 260 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 AC107399.1-201ENST00000451226 265 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 U8.21-201ENST00000459536 136 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 RPS29P27-201ENST00000463711 170 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.44□□□□□ -2.02
YIPF1Q9Y548 PTP4A1P4-201ENST00000512479 322 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.44□□□□□ -2.02
YIPF1Q9Y548 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.44□□□□□ -2.02
YIPF1Q9Y548 AP005902.1-201ENST00000521358 186 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 IGKV3-31-201ENST00000523109 329 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.44□□□□□ -2.02
YIPF1Q9Y548 RPS3AP23-202ENST00000574601 686 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 AL133215.3-201ENST00000609801 448 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 AC025253.1-201ENST00000613623 543 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 MTND5P30-201ENST00000452896 1731 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 AC080128.1-201ENST00000474389 1917 ntBASIC2.44□□□□□ -2.02
YIPF1Q9Y548 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
YIPF1Q9Y548 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
YIPF1Q9Y548 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
YIPF1Q9Y548 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.43□□□□□ -2.02
YIPF1Q9Y548 RNU6-1010P-201ENST00000362757 107 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 Y_RNA.263-201ENST00000364659 114 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 Y_RNA.356-201ENST00000365475 113 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 RNU6-43P-201ENST00000384302 107 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 RNU6-933P-201ENST00000384424 107 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 Y_RNA.529-201ENST00000384586 119 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 RN7SKP158-201ENST00000410453 326 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 RNU4-14P-201ENST00000410858 122 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 Z82205.1-201ENST00000428456 297 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.43□□□□□ -2.02
YIPF1Q9Y548 RPS12P2-201ENST00000439728 269 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.43□□□□□ -2.02
YIPF1Q9Y548 AC096638.1-201ENST00000444678 216 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.43□□□□□ -2.02
YIPF1Q9Y548 snoU13.26-201ENST00000459452 105 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 RPL22P13-201ENST00000493291 347 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 AC091874.1-201ENST00000511402 339 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 COX6CP5-201ENST00000527162 228 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.43□□□□□ -2.02
YIPF1Q9Y548 POLR3GP2-201ENST00000588366 668 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 AC124303.1-201ENST00000605703 360 ntBASIC2.43□□□□□ -2.02
YIPF1Q9Y548 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.43□□□□□ -2.02
YIPF1Q9Y548 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.43□□□□□ -2.02
YIPF1Q9Y548 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.43□□□□□ -2.02
YIPF1Q9Y548 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.42□□□□□ -2.02
YIPF1Q9Y548 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
YIPF1Q9Y548 AC010329.5-201ENST00000623497 2174 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 Y_RNA.40-201ENST00000362645 93 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 RNU6-227P-201ENST00000362865 103 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 U3.13-201ENST00000364804 214 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 SNORD32A-201ENST00000364805 84 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 SET-203ENST00000372688 801 ntTSL 2 BASIC2.42□□□□□ -2.02
YIPF1Q9Y548 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
YIPF1Q9Y548 Y_RNA.473-201ENST00000384333 102 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 Y_RNA.474-201ENST00000384341 102 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 RNU6-1222P-201ENST00000384615 107 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 RNU2-23P-201ENST00000410545 195 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 AP000275.1-201ENST00000411943 390 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 RPL37P10-201ENST00000412884 288 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 RPS15AP28-201ENST00000435088 386 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.42□□□□□ -2.02
YIPF1Q9Y548 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.42□□□□□ -2.02
YIPF1Q9Y548 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.42□□□□□ -2.02
YIPF1Q9Y548 SMURF2P1-201ENST00000514992 481 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 RNA5SP112-201ENST00000515937 99 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 RNU1-54P-201ENST00000517181 120 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 MIR3199-1-201ENST00000582434 88 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.42□□□□□ -2.02
YIPF1Q9Y548 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.42□□□□□ -2.02
YIPF1Q9Y548 AC016727.1-205ENST00000605437 569 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 AL132765.2-201ENST00000610812 351 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 MIR6873-201ENST00000622788 63 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 AC007792.1-201ENST00000623023 402 ntBASIC2.42□□□□□ -2.02
YIPF1Q9Y548 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.42□□□□□ -2.02
YIPF1Q9Y548 AC002543.1-201ENST00000299783 1954 ntBASIC2.41□□□□□ -2.02
YIPF1Q9Y548 AC135776.4-201ENST00000624300 1904 ntBASIC2.41□□□□□ -2.02
YIPF1Q9Y548 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
YIPF1Q9Y548 OR56A5-201ENST00000340110 738 ntBASIC2.41□□□□□ -2.02
YIPF1Q9Y548 RNU6-212P-201ENST00000362642 104 ntBASIC2.41□□□□□ -2.02
YIPF1Q9Y548 VTRNA1-1-201ENST00000363120 99 ntBASIC2.41□□□□□ -2.02
YIPF1Q9Y548 RNU6-1059P-201ENST00000363752 98 ntBASIC2.41□□□□□ -2.02
YIPF1Q9Y548 RNU6-461P-201ENST00000364195 107 ntBASIC2.41□□□□□ -2.02
YIPF1Q9Y548 MIR186-201ENST00000384988 86 ntBASIC2.41□□□□□ -2.02
YIPF1Q9Y548 NCOR1P3-201ENST00000420479 303 ntBASIC2.41□□□□□ -2.02
YIPF1Q9Y548 BX276092.3-201ENST00000424182 230 ntBASIC2.41□□□□□ -2.02
YIPF1Q9Y548 RPL30P4-201ENST00000429309 333 ntBASIC2.41□□□□□ -2.02
YIPF1Q9Y548 USP9YP30-201ENST00000430729 455 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms