Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 RNA5SP59-201ENST00000410922 110 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC010975.2-201ENST00000427781 588 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.27□□□□□ -2.21
LRRC42Q9Y546 SNRPGP13-201ENST00000442212 177 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC244505.5-201ENST00000443639 207 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC022364.2-201ENST00000457963 554 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 SNRPGP7-201ENST00000469016 106 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC079382.1-201ENST00000493346 557 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.27□□□□□ -2.21
LRRC42Q9Y546 LRRC34P2-201ENST00000514850 553 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 RNU6-445P-201ENST00000516949 107 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AP002963.1-201ENST00000530590 184 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 MTCO3P23-201ENST00000561363 289 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AGGF1P4-201ENST00000568249 801 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.27□□□□□ -2.21
LRRC42Q9Y546 MIR3913-1-201ENST00000577744 102 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 MIR3136-201ENST00000583498 78 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC110760.3-201ENST00000598794 467 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 VN1R107P-201ENST00000601784 209 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC107304.1-201ENST00000604229 296 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC010900.2-201ENST00000604508 210 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC002044.1-201ENST00000606707 158 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 MIR8081-201ENST00000611533 95 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LRRC42Q9Y546 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC091931.1-201ENST00000623488 728 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 AC009161.2-201ENST00000624626 138 ntBASIC1.27□□□□□ -2.21
LRRC42Q9Y546 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
LRRC42Q9Y546 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
LRRC42Q9Y546 CBX3P1-201ENST00000325243 554 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 SNORD114-6-201ENST00000364393 72 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 RNA5SP126-201ENST00000365092 109 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 Y_RNA.332-201ENST00000365271 113 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 RNU6-142P-201ENST00000384019 107 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 Y_RNA.480-201ENST00000384364 102 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 RNU6-434P-201ENST00000384376 107 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 SNORA67.5-201ENST00000391036 107 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 RNU1-78P-201ENST00000391248 165 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 PIGFP2-201ENST00000421400 651 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 SNAP23P1-201ENST00000433229 246 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AC244670.1-201ENST00000436879 112 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AC245517.4-201ENST00000448601 281 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 RNU6-333P-201ENST00000459117 107 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 GMFBP1-201ENST00000467831 427 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 MTND3P7-201ENST00000474435 343 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AC132942.1-201ENST00000486753 483 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AC010486.2-201ENST00000505572 483 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 RNA5SP490-201ENST00000517141 136 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AC087441.2-201ENST00000529141 262 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AK6P1-201ENST00000540219 478 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AP001485.1-201ENST00000604799 199 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AC025754.2-201ENST00000606491 432 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 MIR8074-201ENST00000615081 81 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 AC022513.1-201ENST00000624512 117 ntBASIC1.26□□□□□ -2.21
LRRC42Q9Y546 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
LRRC42Q9Y546 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.25□□□□□ -2.21
LRRC42Q9Y546 RNU6-266P-201ENST00000364225 107 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 MTCYBP2-201ENST00000407745 171 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 RNU2-9P-201ENST00000410194 145 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 RNA5SP201-201ENST00000410316 124 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 RN7SKP61-201ENST00000410642 295 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.25□□□□□ -2.21
LRRC42Q9Y546 AL590135.1-201ENST00000422215 156 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 AC019205.3-201ENST00000424573 156 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 AL513185.2-201ENST00000425543 193 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 AL354695.1-201ENST00000427935 228 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.25□□□□□ -2.21
LRRC42Q9Y546 AC016700.2-201ENST00000446011 156 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 HMGN2P18-201ENST00000450680 270 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 C1DP4-201ENST00000455429 424 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.25□□□□□ -2.21
LRRC42Q9Y546 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.25□□□□□ -2.21
LRRC42Q9Y546 SCARNA18-201ENST00000459004 134 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 snoU13.15-201ENST00000459407 104 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 AC015911.1-201ENST00000495111 156 ntBASIC1.25□□□□□ -2.21
LRRC42Q9Y546 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.25□□□□□ -2.21
LRRC42Q9Y546 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.25□□□□□ -2.21
LRRC42Q9Y546 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.25□□□□□ -2.21
LRRC42Q9Y546 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms