Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AL353149.1-201ENST00000610667 244 ntBASIC-0.31□□□□□ -2.46
UBE2D4Q9Y2X8 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.31□□□□□ -2.46
UBE2D4Q9Y2X8 AL163051.2-201ENST00000618976 735 ntBASIC-0.31□□□□□ -2.46
UBE2D4Q9Y2X8 AC011155.2-201ENST00000623202 216 ntBASIC-0.31□□□□□ -2.46
UBE2D4Q9Y2X8 AC019226.1-201ENST00000625666 515 ntBASIC-0.31□□□□□ -2.46
UBE2D4Q9Y2X8 RNU6-858P-201ENST00000362436 107 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 RNU6-188P-201ENST00000364207 107 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 RNU6-512P-201ENST00000364438 103 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 RNU6-657P-201ENST00000383904 107 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 RNU6-793P-201ENST00000384233 104 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 SNORD116-13-201ENST00000384408 92 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 Y_RNA.548-201ENST00000384656 105 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 MIR518A1-201ENST00000385068 85 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 SNORA75.2-201ENST00000391138 150 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 SNORA75.3-201ENST00000391231 150 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 ARL5AP1-201ENST00000418991 388 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 AL353777.1-201ENST00000425552 326 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 RPS15AP10-201ENST00000432472 382 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 AC012308.1-201ENST00000451232 178 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 AC016256.1-201ENST00000547971 354 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 AC022523.2-201ENST00000561045 150 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 AC095057.3-201ENST00000567102 1157 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 MIR5589-201ENST00000579442 60 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 MIR3529-201ENST00000637713 78 ntBASIC-0.32□□□□□ -2.46
UBE2D4Q9Y2X8 MIR340-201ENST00000362125 95 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 RNA5SP98-201ENST00000363158 137 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 SUGT1P1-201ENST00000379514 476 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 MIR329-1-201ENST00000385028 80 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 AC073261.1-201ENST00000429409 121 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 RNU7-34P-201ENST00000459394 64 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 MED28P2-201ENST00000475771 317 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 RNU6-390P-201ENST00000516259 103 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 RNU6-947P-201ENST00000516264 106 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 RNU6-922P-201ENST00000516753 99 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 AC036111.3-201ENST00000526389 112 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 MIR5695-201ENST00000579717 85 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 MIR4802-201ENST00000581881 80 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 AF038458.1-201ENST00000588406 262 ntBASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.33□□□□□ -2.46
UBE2D4Q9Y2X8 RNU6-843P-201ENST00000384454 104 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 RNU6-754P-201ENST00000391166 107 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 RNU6-177P-201ENST00000411257 104 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 AC020550.1-201ENST00000447385 163 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 snoU13.14-201ENST00000459372 104 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 AC013828.1-201ENST00000481845 158 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 SCARNA8-201ENST00000515924 131 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 AC106038.2-201ENST00000520706 568 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 AC023157.2-201ENST00000540596 141 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 AC240442.1-201ENST00000616055 283 ntBASIC-0.34□□□□□ -2.46
UBE2D4Q9Y2X8 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 U8.7-201ENST00000364940 136 ntBASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 SNORA8.3-201ENST00000384679 139 ntBASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 MTND1P20-201ENST00000430341 950 ntBASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 MTND2P21-201ENST00000436242 1042 ntBASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 AC110760.3-202ENST00000515177 371 ntBASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 RPL23AP91-201ENST00000569211 455 ntBASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 BNIP3P30-201ENST00000601184 574 ntBASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 AC080078.2-201ENST00000603766 501 ntBASIC-0.35□□□□□ -2.47
UBE2D4Q9Y2X8 AL390237.1-201ENST00000404226 1415 ntBASIC-0.36□□□□□ -2.47
UBE2D4Q9Y2X8 SNORD114-28-201ENST00000363610 72 ntBASIC-0.36□□□□□ -2.47
UBE2D4Q9Y2X8 RNA5SP128-201ENST00000365305 116 ntBASIC-0.36□□□□□ -2.47
UBE2D4Q9Y2X8 RNU6-487P-201ENST00000365430 104 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms