Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 AC039056.2-201ENST00000622261 511 ntBASIC4.25□□□□□ -1.73
USP20Q9Y2K6 AC091932.3-201ENST00000624223 323 ntBASIC4.25□□□□□ -1.73
USP20Q9Y2K6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.25□□□□□ -1.73
USP20Q9Y2K6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.25□□□□□ -1.73
USP20Q9Y2K6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
USP20Q9Y2K6 Y_RNA.238-201ENST00000364441 102 ntBASIC4.24□□□□□ -1.73
USP20Q9Y2K6 RNU6-449P-201ENST00000383914 107 ntBASIC4.24□□□□□ -1.73
USP20Q9Y2K6 U1.1-201ENST00000384101 164 ntBASIC4.24□□□□□ -1.73
USP20Q9Y2K6 AC019205.3-201ENST00000424573 156 ntBASIC4.24□□□□□ -1.73
USP20Q9Y2K6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.24□□□□□ -1.73
USP20Q9Y2K6 IFNA11P-201ENST00000446352 526 ntBASIC4.24□□□□□ -1.73
USP20Q9Y2K6 RNU6-581P-201ENST00000516214 105 ntBASIC4.24□□□□□ -1.73
USP20Q9Y2K6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.24□□□□□ -1.73
USP20Q9Y2K6 AC087499.8-201ENST00000578406 226 ntBASIC4.24□□□□□ -1.73
USP20Q9Y2K6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.24□□□□□ -1.73
USP20Q9Y2K6 AL110115.1-201ENST00000614396 364 ntBASIC4.24□□□□□ -1.73
USP20Q9Y2K6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.24□□□□□ -1.73
USP20Q9Y2K6 MIR3674-201ENST00000636576 68 ntBASIC4.24□□□□□ -1.73
USP20Q9Y2K6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.24□□□□□ -1.73
USP20Q9Y2K6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
USP20Q9Y2K6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
USP20Q9Y2K6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP20Q9Y2K6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP20Q9Y2K6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP20Q9Y2K6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USP20Q9Y2K6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.23□□□□□ -1.73
USP20Q9Y2K6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP20Q9Y2K6 RNU4-84P-201ENST00000364200 139 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 SNORD116-18-201ENST00000383961 92 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 Y_RNA.568-201ENST00000384742 113 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 RN7SKP156-201ENST00000410308 342 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.23□□□□□ -1.73
USP20Q9Y2K6 RPS27AP9-201ENST00000477681 438 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 AC090525.1-201ENST00000479116 478 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 HMGB3P3-201ENST00000510526 400 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 AC026726.1-201ENST00000512859 601 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 RNA5SP208-201ENST00000516156 78 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 RNU6-155P-201ENST00000516347 100 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.23□□□□□ -1.73
USP20Q9Y2K6 AC009127.3-201ENST00000570531 403 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 RNU6-91P-201ENST00000607774 107 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 AC092628.2-201ENST00000622492 339 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.23□□□□□ -1.73
USP20Q9Y2K6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.23□□□□□ -1.73
USP20Q9Y2K6 AL034408.1-202ENST00000636088 415 ntBASIC4.23□□□□□ -1.73
USP20Q9Y2K6 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.23□□□□□ -1.73
USP20Q9Y2K6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP20Q9Y2K6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP20Q9Y2K6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 RNU6-270P-201ENST00000364131 105 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 RNA5SP167-201ENST00000365461 116 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 RNU4-17P-201ENST00000365598 141 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 SNORA18.3-201ENST00000384122 132 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 Y_RNA.497-201ENST00000384447 98 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 SNORA1.3-201ENST00000384676 136 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 U3.26-201ENST00000391236 204 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 AL591419.1-201ENST00000427423 339 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 SNORA67.7-201ENST00000516664 135 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 SNORA31.16-201ENST00000516773 139 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 AC090877.1-201ENST00000561418 344 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 CUL1P1-201ENST00000509510 2425 ntBASIC4.22□□□□□ -1.73
USP20Q9Y2K6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
USP20Q9Y2K6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.21□□□□□ -1.73
USP20Q9Y2K6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP20Q9Y2K6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
USP20Q9Y2K6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
USP20Q9Y2K6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.21□□□□□ -1.74
USP20Q9Y2K6 RNA5SP97-201ENST00000365006 84 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 RNU6-1130P-201ENST00000365434 107 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 AL359837.1-201ENST00000381357 287 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 Y_RNA.488-201ENST00000384403 102 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 MIR554-201ENST00000384874 96 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 RNA5SP475-201ENST00000410568 110 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 RN7SKP53-201ENST00000411337 315 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 AC096649.2-201ENST00000416186 393 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 AC099548.1-201ENST00000421443 426 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 AL162725.1-201ENST00000435405 301 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 SNORA71B-202ENST00000439232 272 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.21□□□□□ -1.74
USP20Q9Y2K6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.21□□□□□ -1.74
USP20Q9Y2K6 AIG1P1-201ENST00000503376 148 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 RAC1P2-201ENST00000511164 579 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 SNORD19.2-201ENST00000516978 73 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 RNU2-12P-201ENST00000517216 168 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.21□□□□□ -1.74
USP20Q9Y2K6 AC006380.1-201ENST00000603598 186 ntBASIC4.21□□□□□ -1.74
USP20Q9Y2K6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms