Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU6-475P-201ENST00000516073 104 ntBASIC3.14□□□□□ -1.91
SSX2IPQ9Y2D8 RNU6-581P-201ENST00000516214 105 ntBASIC3.14□□□□□ -1.91
SSX2IPQ9Y2D8 RNU7-4P-201ENST00000516961 62 ntBASIC3.14□□□□□ -1.91
SSX2IPQ9Y2D8 Y_RNA.720-201ENST00000517166 92 ntBASIC3.14□□□□□ -1.91
SSX2IPQ9Y2D8 DNAJC8P1-201ENST00000554535 372 ntBASIC3.14□□□□□ -1.91
SSX2IPQ9Y2D8 MIR4680-201ENST00000580906 66 ntBASIC3.14□□□□□ -1.91
SSX2IPQ9Y2D8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.14□□□□□ -1.91
SSX2IPQ9Y2D8 HMGN2P15-201ENST00000585707 270 ntBASIC3.14□□□□□ -1.91
SSX2IPQ9Y2D8 AL158827.2-201ENST00000602494 330 ntBASIC3.14□□□□□ -1.91
SSX2IPQ9Y2D8 AP001836.1-201ENST00000604675 523 ntBASIC3.14□□□□□ -1.91
SSX2IPQ9Y2D8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.14□□□□□ -1.91
SSX2IPQ9Y2D8 AL691447.3-201ENST00000635020 330 ntBASIC3.14□□□□□ -1.91
SSX2IPQ9Y2D8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 AC010680.1-201ENST00000590024 3590 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 AC005592.1-201ENST00000566527 1640 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 AC073325.2-201ENST00000339545 159 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 SNORD50.1-201ENST00000362987 71 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 Y_RNA.314-201ENST00000365114 102 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 RNU6-1027P-201ENST00000383998 107 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 RNU6-985P-201ENST00000410182 104 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 AC074117.2-201ENST00000417130 397 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 MRPS18CP6-201ENST00000423587 223 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 AC087499.2-201ENST00000432861 149 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 AC006199.1-201ENST00000548728 219 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 AC009318.2-201ENST00000610917 651 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 AC241585.2-209ENST00000638217 143 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.13□□□□□ -1.91
SSX2IPQ9Y2D8 AP003122.5-201ENST00000527668 3766 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 Y_RNA.123-201ENST00000363338 102 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 RNU6-301P-201ENST00000384277 107 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 MIR625-201ENST00000385047 85 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 RNU6-700P-201ENST00000391043 107 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AC113618.1-201ENST00000416747 285 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 MTCYBP10-201ENST00000424905 650 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AC063976.3-201ENST00000426849 329 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 Z96811.1-201ENST00000445880 108 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AC012308.1-201ENST00000451232 178 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AC079354.2-201ENST00000453523 154 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AL031183.1-201ENST00000457667 207 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 RNU6-1137P-201ENST00000517073 99 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AC009163.5-201ENST00000575421 637 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 7SK.7-201ENST00000603504 247 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AL356157.2-201ENST00000605122 111 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AL138825.1-201ENST00000618587 192 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AC097372.5-201ENST00000623665 376 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AL078596.1-201ENST00000624856 447 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 AL606534.2-204ENST00000635008 178 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 MIR3529-201ENST00000637713 78 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 HAUS6P2-201ENST00000433254 2404 ntBASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SSX2IPQ9Y2D8 MTND5P16-201ENST00000460269 1703 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 SNORD56.1-201ENST00000362913 68 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 RNU6-799P-201ENST00000363567 107 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 AC007098.1-201ENST00000420122 367 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 AC243964.1-201ENST00000441814 261 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 RN7SKP210-201ENST00000459176 261 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 MED28P2-201ENST00000475771 317 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 RPL30P10-201ENST00000488148 337 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 RN7SL20P-201ENST00000488827 297 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 AC105758.1-201ENST00000506038 399 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 Y_RNA.721-201ENST00000517207 102 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 AC004584.2-201ENST00000570407 410 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 MIR5701-3-201ENST00000578890 82 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 MIR5701-1-201ENST00000585138 82 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 AC019159.1-201ENST00000605094 187 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 MIR5701-2-201ENST00000615634 82 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 AL162373.1-201ENST00000620433 407 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 AC091564.4-201ENST00000533934 2194 ntBASIC3.11□□□□□ -1.91
SSX2IPQ9Y2D8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 AC009541.1-201ENST00000438279 2662 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms