Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC019235.1-201ENST00000503847 207 ntBASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 SNORA14.1-201ENST00000516113 141 ntBASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 Y_RNA.693-201ENST00000516641 110 ntBASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 RNA5SP137-201ENST00000516833 135 ntBASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 CENPUP1-201ENST00000526649 1202 ntBASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 NDUFA5P6-201ENST00000542110 379 ntBASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 MIR4419B-201ENST00000577260 68 ntBASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 AC103987.3-201ENST00000582071 292 ntBASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 VN1R80P-201ENST00000597126 338 ntBASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 AC005034.5-201ENST00000604219 466 ntBASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 AC005296.1-201ENST00000616145 209 ntBASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 AC103705.1-201ENST00000619013 241 ntBASIC1.62□□□□□ -2.15
TRAPPC4Q9Y296 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 ZNF702P-202ENST00000434269 1966 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 RNU4-75P-201ENST00000364621 146 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 RNU6-827P-201ENST00000365553 106 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 RNU4-20P-201ENST00000365601 151 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 RNU6-692P-201ENST00000384496 107 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 MIR29B2-201ENST00000385055 81 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 RNA5SP219-201ENST00000390940 113 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 SNORA40.18-201ENST00000391200 128 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AC016907.1-201ENST00000419483 435 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 SNAP23P1-201ENST00000433229 246 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 HMGN2P3-201ENST00000433603 273 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 HMGN2P5-201ENST00000436882 273 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 snoU13.26-201ENST00000459452 105 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AC091885.1-201ENST00000506658 268 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 RNA5SP401-201ENST00000515920 127 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 RNU5F-2P-201ENST00000516066 82 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 RNU6-189P-201ENST00000516120 101 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AC115990.1-201ENST00000526957 301 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AL118558.2-201ENST00000556294 238 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AC027807.1-201ENST00000559921 996 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 MIR4299-201ENST00000577899 72 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 ELOCP5-201ENST00000604924 333 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AL670379.2-201ENST00000604983 252 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AC004908.3-201ENST00000610248 625 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AC093783.1-201ENST00000612976 329 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AC022202.1-201ENST00000613515 211 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 AC241585.2-209ENST00000638217 143 ntBASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
TRAPPC4Q9Y296 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AP000560.1-201ENST00000624150 1937 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AP006437.1-201ENST00000641440 3685 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 RNA5SP276-201ENST00000362580 94 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 RNU6-944P-201ENST00000364023 107 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 RNU4-40P-201ENST00000364351 143 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 RNU6-1141P-201ENST00000364520 107 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 SNORD32A-201ENST00000364805 84 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 RNU6-43P-201ENST00000384302 107 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 MIR514A2-201ENST00000385131 88 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 MIR514A3-201ENST00000385132 88 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 POLHP1-201ENST00000411806 470 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 DLGAP5P1-201ENST00000430307 464 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 RPS15AP10-201ENST00000432472 382 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AL121601.2-201ENST00000438019 707 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 MTND1P1-201ENST00000445453 368 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AL031274.1-201ENST00000450334 232 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 RPL23AP3-201ENST00000453844 468 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 TPTE2P5-203ENST00000458118 728 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 RNU7-138P-201ENST00000459479 64 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AC009646.1-201ENST00000510455 318 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 SNORA4.4-201ENST00000515921 135 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AP000763.2-201ENST00000540641 163 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AC103996.1-201ENST00000555468 102 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 MIR3618-201ENST00000580330 88 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AL356157.2-201ENST00000605122 111 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AC018889.1-201ENST00000605372 397 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 RNU6-85P-201ENST00000605989 107 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AC092954.2-201ENST00000609103 430 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 AC090517.3-201ENST00000625170 141 ntBASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TRAPPC4Q9Y296 snoU2_19.1-201ENST00000362361 80 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 Y_RNA.41-201ENST00000362646 102 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 Y_RNA.167-201ENST00000363735 109 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 Y_RNA.436-201ENST00000384097 102 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 MIR9-3-201ENST00000385084 90 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 SNORD37.1-201ENST00000390968 65 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 SNORA26.9-201ENST00000391322 122 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms