Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 SNORA26.3-201ENST00000391119 136 ntBASIC4.33□□□□□ -1.72
BRPF3Q9ULD4 AL603908.1-201ENST00000406098 201 ntBASIC4.33□□□□□ -1.72
BRPF3Q9ULD4 AL445584.1-201ENST00000431451 330 ntBASIC4.33□□□□□ -1.72
BRPF3Q9ULD4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.33□□□□□ -1.72
BRPF3Q9ULD4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.33□□□□□ -1.72
BRPF3Q9ULD4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.33□□□□□ -1.72
BRPF3Q9ULD4 AP000705.1-201ENST00000454567 350 ntBASIC4.33□□□□□ -1.72
BRPF3Q9ULD4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.33□□□□□ -1.72
BRPF3Q9ULD4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
BRPF3Q9ULD4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.33□□□□□ -1.72
BRPF3Q9ULD4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.33□□□□□ -1.72
BRPF3Q9ULD4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 MIR148B-201ENST00000362252 99 ntBASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 MIR329-1-201ENST00000385028 80 ntBASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 AC012306.1-201ENST00000423267 114 ntBASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 RPS15AP5-201ENST00000436276 388 ntBASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 RPL26P26-201ENST00000480251 434 ntBASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 AC092185.1-201ENST00000491371 97 ntBASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 SERF1AP1-201ENST00000514575 187 ntBASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 RNU4-71P-201ENST00000516258 113 ntBASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 AC130289.1-201ENST00000577321 73 ntBASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 AC098479.1-201ENST00000609225 154 ntBASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
BRPF3Q9ULD4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 RNA5SP124-201ENST00000362739 110 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 RNY1-201ENST00000364228 113 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 RNU6-1145P-201ENST00000384246 107 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 Y_RNA.785-201ENST00000384290 109 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 RNU5A-5P-201ENST00000411054 116 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 AC126124.2-201ENST00000413542 321 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 AC019205.3-201ENST00000424573 156 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 RN7SL132P-201ENST00000478131 296 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 GZMAP1-201ENST00000503054 631 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 Y_RNA.700-201ENST00000516806 100 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 RNU6-182P-201ENST00000516970 105 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 AC068657.1-201ENST00000520807 306 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 AL078605.1-201ENST00000603529 500 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 SNORD113-5-201ENST00000607261 78 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 AL121772.2-201ENST00000614331 297 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 GABRG2-229ENST00000641017 3628 ntBASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BRPF3Q9ULD4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 RNU1-75P-201ENST00000347264 129 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 Y_RNA.269-201ENST00000364685 89 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 RNA5SP51-201ENST00000364750 119 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 RNU6-805P-201ENST00000365643 106 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 AL033519.2-201ENST00000403958 392 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 CYCSP19-201ENST00000411715 316 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 RPS26P42-201ENST00000413485 326 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 PTGES3P4-201ENST00000426243 356 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 AC073901.1-201ENST00000462471 408 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 AC107626.1-201ENST00000471084 183 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 SEPT14P8-201ENST00000508026 178 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 SNORA31.16-201ENST00000516773 139 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 AC115990.1-201ENST00000526957 301 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 AC091152.3-201ENST00000604227 325 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 AC107294.3-201ENST00000609211 526 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 U2.14-201ENST00000615943 113 ntBASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRPF3Q9ULD4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 AC002543.1-201ENST00000299783 1954 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 RNU6-280P-201ENST00000364145 104 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 Y_RNA.286-201ENST00000364813 102 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 RNU6-19P-201ENST00000384718 107 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 RNA5SP252-201ENST00000391131 119 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 RNU4-30P-201ENST00000410245 143 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 RNU6-1140P-201ENST00000410517 106 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 AL353705.1-201ENST00000433468 480 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 SUMO1P3-201ENST00000439961 304 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 SUMO1P2-201ENST00000452524 304 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 AC090525.1-201ENST00000479116 478 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 RNU6-567P-201ENST00000516746 107 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 MIR2276-201ENST00000516886 89 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 RNA5SP54-201ENST00000516951 92 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 SNORD19.2-201ENST00000516978 73 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 SNORA31.21-201ENST00000517180 77 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 SNORA81.3-201ENST00000517283 198 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 MIR4423-201ENST00000580922 80 ntBASIC4.29□□□□□ -1.72
BRPF3Q9ULD4 AC127459.3-201ENST00000624328 466 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms