Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC074344.1-201ENST00000512823 224 ntBASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 AC068620.3-201ENST00000602749 560 ntBASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 AC012507.3-201ENST00000603556 477 ntBASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 AC084824.5-201ENST00000612009 413 ntBASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 PART1_2.1-201ENST00000612397 250 ntBASIC0.63□□□□□ -2.31
VPS29Q9UBQ0 HSBP1P2-201ENST00000299671 229 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 SNORD114-24-201ENST00000365029 72 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 AL117342.1-201ENST00000404861 406 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 MTCYBP2-201ENST00000407745 171 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 RNU6-1245P-201ENST00000411130 106 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 ISCA1P6-201ENST00000427740 390 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 RNU7-34P-201ENST00000459394 64 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 AC010531.2-201ENST00000465012 153 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 AC104806.1-201ENST00000508720 308 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 RNU6-123P-201ENST00000516163 102 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 RNU6-1041P-201ENST00000516254 102 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 AC136628.3-201ENST00000521868 290 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 MTCO2P2-201ENST00000591258 225 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 AP002360.4-201ENST00000606980 481 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 AC099786.3-201ENST00000565735 1410 ntBASIC0.62□□□□□ -2.31
VPS29Q9UBQ0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 RNU6-1123P-201ENST00000362347 106 ntBASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 MIR608-201ENST00000384820 100 ntBASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 AC063976.4-201ENST00000421971 163 ntBASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 AL353777.1-201ENST00000425552 326 ntBASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 MTND1P32-201ENST00000433043 938 ntBASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 AC007395.1-201ENST00000451333 677 ntBASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 RNU7-14P-201ENST00000459331 62 ntBASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 SNORD124-201ENST00000459577 104 ntBASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 AC107934.1-201ENST00000522215 217 ntBASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 AC087883.1-201ENST00000551882 391 ntBASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 AC008751.2-201ENST00000597885 980 ntBASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 AC136443.5-201ENST00000603741 370 ntBASIC0.61□□□□□ -2.31
VPS29Q9UBQ0 AC073343.1-201ENST00000328239 651 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 Y_RNA.110-201ENST00000363220 99 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 AC114482.1-201ENST00000418010 247 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 AL049829.1-201ENST00000465411 156 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 RNA5SP168-201ENST00000516642 112 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 DEFB108E-201ENST00000524692 240 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 AP001893.2-201ENST00000526949 202 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 MTATP6P15-201ENST00000527233 835 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 AC021231.3-201ENST00000558497 370 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 AC008752.3-201ENST00000588113 712 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 AC105129.3-201ENST00000605455 485 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 AL139286.2-201ENST00000606838 396 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 OR4G1P-203ENST00000641984 1631 ntBASIC0.6□□□□□ -2.31
VPS29Q9UBQ0 MTND4P14-201ENST00000435799 1354 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 RNU4-79P-201ENST00000362764 141 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 RNU4-56P-201ENST00000364700 142 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 SNORD116.1-201ENST00000365628 92 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 MIR1276-201ENST00000408707 83 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 RPL22P18-201ENST00000417197 377 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 C1DP2-201ENST00000418167 426 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 RPS3AP37-201ENST00000419176 745 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AL590135.1-201ENST00000422215 156 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AC019205.3-201ENST00000424573 156 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 GTF2IP13-201ENST00000438487 386 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AC016700.2-201ENST00000446011 156 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 MTND1P12-201ENST00000455231 147 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 SNRPGP7-201ENST00000469016 106 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AP000797.1-201ENST00000478870 387 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AC015911.1-201ENST00000495111 156 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 SNORA31.2-201ENST00000516019 134 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 SNORA31.4-201ENST00000516049 129 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 RNU5F-4P-201ENST00000516581 114 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 RNU6-1098P-201ENST00000516772 96 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AC090142.3-201ENST00000519012 385 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AC011604.1-201ENST00000545978 196 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 ZNF321P-202ENST00000550843 495 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 CYP3A137P-201ENST00000562436 69 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 MIR4307-201ENST00000582802 84 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 FAM106DP-201ENST00000586416 501 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AC121334.2-201ENST00000605387 271 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 AC008147.4-201ENST00000617570 1204 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 U4.7-201ENST00000638126 106 ntBASIC0.59□□□□□ -2.31
VPS29Q9UBQ0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms