Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 Y_RNA.99-201ENST00000363138 105 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 Y_RNA.167-201ENST00000363735 109 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 ARL5AP1-201ENST00000418991 388 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 SRIP2-201ENST00000428470 166 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 MTND3P16-201ENST00000452205 344 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-1037P-201ENST00000459571 107 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 AC008628.2-201ENST00000502605 298 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 AC019235.1-201ENST00000503847 207 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 MIR449C-201ENST00000516047 92 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-991P-201ENST00000516168 107 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 AL512360.1-201ENST00000555346 234 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 MIR5692C1-201ENST00000585309 91 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 SNORA43.4-201ENST00000629559 138 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 AC131280.1-202ENST00000624067 4211 ntBASIC1.92□□□□□ -2.1
ZCCHC3Q9NUD5 MTND4P1-201ENST00000457501 1466 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 RNU1-58P-201ENST00000362413 163 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-26P-201ENST00000383985 107 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 Y_RNA.504-201ENST00000384481 104 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 HMGN2P3-201ENST00000433603 273 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 HMGN2P5-201ENST00000436882 273 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 MTND1P1-201ENST00000445453 368 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 MRPS17P9-201ENST00000511924 393 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 RPL39P5-202ENST00000512505 151 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 SNORA19.2-201ENST00000516013 114 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 RNU6-323P-201ENST00000521915 107 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 AC021231.3-201ENST00000558497 370 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 MIR1273D-201ENST00000577266 86 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 AL357078.3-201ENST00000607528 618 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 AC064836.2-201ENST00000609491 462 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 PCGEM1.1-201ENST00000613431 131 ntBASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
ZCCHC3Q9NUD5 MTND4P23-201ENST00000447723 1363 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-1329P-201ENST00000365664 107 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 AL023284.1-201ENST00000403956 276 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 AL357139.1-201ENST00000407792 426 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 RN7SKP32-201ENST00000410167 303 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 RNA5SP425-201ENST00000410336 112 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 AL139156.1-201ENST00000412785 841 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 Z98742.3-201ENST00000418637 326 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 AL139413.1-201ENST00000421309 217 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 AC027124.2-201ENST00000428249 105 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 PMCHL2-203ENST00000457791 237 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 UBE2DNL-203ENST00000474922 222 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-567P-201ENST00000516746 107 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-612P-201ENST00000516909 102 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 AC025423.5-201ENST00000550230 219 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 MIR4435-1-201ENST00000582552 80 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 Z98751.3-201ENST00000604447 521 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 AC092954.2-201ENST00000609103 430 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 AL121757.2-201ENST00000611223 313 ntBASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.9□□□□□ -2.11
ZCCHC3Q9NUD5 Y_RNA.231-201ENST00000364358 102 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 RNA5SP138-201ENST00000365098 114 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 SNORA64-201ENST00000384674 134 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-780P-201ENST00000391030 104 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 RNU11-3P-201ENST00000391111 133 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 EIF4E2P1-201ENST00000393781 255 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 RNA5SP338-201ENST00000410495 85 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 RNU2-40P-201ENST00000410833 196 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-1068P-201ENST00000410958 103 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 RNA5SP508-201ENST00000411327 119 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 SEPT14P3-201ENST00000439401 183 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AC096638.1-201ENST00000444678 216 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AL732372.2-207ENST00000445840 183 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AL353705.4-201ENST00000449661 238 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 HMGN2P18-201ENST00000450680 270 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 SEPT14P2-201ENST00000453405 183 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 RPL38P4-201ENST00000502376 214 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AC105313.1-201ENST00000509121 353 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 SEPT14P4-201ENST00000513445 186 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 HSPE1P18-201ENST00000517602 280 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 IGKV3-31-201ENST00000523109 329 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 FO082796.1-201ENST00000523795 183 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 HMGB1P33-201ENST00000563485 527 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AC109446.1-201ENST00000566172 220 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms