Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 HMGN2P34-201ENST00000437647 269 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AL606517.2-201ENST00000442855 241 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 RNU7-34P-201ENST00000459394 64 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AC092991.1-201ENST00000477176 376 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AC068587.1-201ENST00000483613 781 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 RPS23P5-201ENST00000495419 428 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 HMGN1P12-201ENST00000499125 195 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AC112204.1-201ENST00000502591 103 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AC091435.1-201ENST00000505442 584 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AC034244.1-201ENST00000507687 207 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 LRRC34P2-201ENST00000514850 553 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 SNORA31.4-201ENST00000516049 129 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 SNORA31.10-201ENST00000516482 106 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AC136624.4-201ENST00000573044 370 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AC009977.1-201ENST00000586015 570 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AC008751.2-201ENST00000597885 980 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AL929325.1-201ENST00000603096 117 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AL031775.1-201ENST00000607014 887 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 uc_338.17-201ENST00000619633 179 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AP003485.2-201ENST00000623636 610 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 AC068724.3-201ENST00000625906 87 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 SNORA43.4-201ENST00000629559 138 ntBASIC0.39□□□□□ -2.35
CDC42SE1Q9NRR8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 snoU2-30.2-201ENST00000362805 70 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-552P-201ENST00000362869 119 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 Y_RNA.132-201ENST00000363421 102 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-660P-201ENST00000364566 109 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 SNORA36A-201ENST00000384221 132 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-1026P-201ENST00000384465 108 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 MIR200A-201ENST00000384875 90 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-387P-201ENST00000411331 105 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AL117339.3-201ENST00000418733 162 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 MTATP6P16-201ENST00000434543 526 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 MTCO3P18-201ENST00000440206 761 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AC245047.7-201ENST00000440265 293 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 NUTF2P7-201ENST00000453086 375 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 TRBVA-201ENST00000498804 316 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 MTCO3P7-201ENST00000510008 774 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 RNU2-34P-201ENST00000516534 121 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AC109479.2-201ENST00000517842 174 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AC091489.2-201ENST00000566263 604 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AC090517.1-201ENST00000569307 266 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 TMF1P1-201ENST00000576058 373 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AC008739.3-201ENST00000603262 127 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AL121992.2-201ENST00000606262 256 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AL731566.2-201ENST00000618971 317 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AP001002.2-201ENST00000625137 386 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 AC004808.1-201ENST00000627671 721 ntBASIC0.38□□□□□ -2.35
CDC42SE1Q9NRR8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 RNA5SP361-201ENST00000362686 118 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 SNORD18A-201ENST00000363753 72 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-1303P-201ENST00000364841 107 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 Y_RNA.287-201ENST00000364853 94 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 SNORD115-7-201ENST00000365306 82 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-641P-201ENST00000384006 107 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-533P-201ENST00000384144 107 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-505P-201ENST00000384427 107 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-83P-201ENST00000384568 112 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-253P-201ENST00000384730 105 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-1031P-201ENST00000384773 107 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 RNA5SP109-201ENST00000391010 116 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 Y_RNA.608-201ENST00000410647 95 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 RPS26P5-201ENST00000418544 335 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AC002486.1-201ENST00000435098 391 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AC073614.1-201ENST00000438690 650 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AL831737.1-201ENST00000441288 271 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 GAPDHP17-201ENST00000449858 1001 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 SNORA84-201ENST00000459229 133 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 RPS27P22-201ENST00000478056 241 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AC005840.1-201ENST00000498412 377 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AC104136.1-201ENST00000512969 394 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 RNU6-1220P-201ENST00000517126 108 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AC090142.3-201ENST00000519012 385 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AC022616.3-201ENST00000523940 148 ntBASIC0.37□□□□□ -2.35
CDC42SE1Q9NRR8 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms