Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AC068790.2-201ENST00000602601 557 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 AC091805.2-201ENST00000603848 235 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 SNORD98-201ENST00000636377 67 ntBASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
EXOSC4Q9NPD3 RNU6-1120P-201ENST00000362988 108 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 Y_RNA.359-201ENST00000365498 102 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 MIR504-201ENST00000385065 83 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 AL590556.1-201ENST00000423231 483 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 OOSP1P1-201ENST00000423265 274 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 VN1R108P-201ENST00000431580 830 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 AC091874.1-201ENST00000511402 339 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 AC105417.1-201ENST00000514691 285 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 AC026407.1-201ENST00000518369 204 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 HIF1AP1-201ENST00000553642 175 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 TRAV32-201ENST00000553993 340 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 AC110760.3-201ENST00000598794 467 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 AL391646.1-201ENST00000603860 190 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 BX248123.2-201ENST00000606318 124 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 uc_338.11-201ENST00000619132 160 ntBASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
EXOSC4Q9NPD3 ELL2P3-201ENST00000457883 1602 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 RNU6-439P-201ENST00000384188 106 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 Y_RNA.480-201ENST00000384364 102 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 SNORA26.9-201ENST00000391322 122 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 RN7SKP284-201ENST00000411002 343 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 SRIP3-201ENST00000413200 219 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AL117339.3-201ENST00000418733 162 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC007098.1-201ENST00000420122 367 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AL353193.1-201ENST00000421444 268 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AL590135.1-201ENST00000422215 156 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC019205.3-201ENST00000424573 156 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 CBX3P6-201ENST00000430257 527 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC244670.1-201ENST00000436879 112 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC016700.2-201ENST00000446011 156 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC013470.1-201ENST00000453438 462 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC015911.1-201ENST00000495111 156 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AK3P2-201ENST00000507976 429 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC116337.1-201ENST00000509680 687 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC109479.2-201ENST00000517842 174 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AL137161.1-201ENST00000532231 390 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AP000873.5-201ENST00000533906 236 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC006362.1-201ENST00000567392 174 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 MIR3198-2-201ENST00000577868 80 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 MIR4255-201ENST00000579351 72 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC103987.3-201ENST00000582071 292 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC010900.2-201ENST00000604508 210 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AL034555.1-201ENST00000604816 211 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 RNU6-85P-201ENST00000605989 107 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC008147.4-201ENST00000617570 1204 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AL354950.2-201ENST00000617939 290 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 U1.36-201ENST00000620684 176 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 MIR3974-201ENST00000637126 96 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 MTND4P14-201ENST00000435799 1354 ntBASIC1.33□□□□□ -2.2
EXOSC4Q9NPD3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 SNORD114-6-201ENST00000364393 72 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 SNORD32B-201ENST00000364460 84 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 SNORD32A-201ENST00000364805 84 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 Y_RNA.553-201ENST00000384670 102 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 RN7SKP51-201ENST00000410781 304 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 RNA5SP100-201ENST00000410903 110 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 RNA5SP59-201ENST00000410922 110 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 AC245102.2-201ENST00000448956 180 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 AL356010.1-201ENST00000456364 102 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 AC005908.1-201ENST00000468701 347 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 AC027575.1-201ENST00000481064 460 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 AC114801.2-201ENST00000503825 781 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 RNVU1-2-201ENST00000516326 135 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 AC115990.1-201ENST00000526957 301 ntBASIC1.32□□□□□ -2.2
EXOSC4Q9NPD3 AP000889.1-201ENST00000530968 660 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 213.2 ms