Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AL133217.1-201ENST00000450980 425 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 AC013470.1-201ENST00000453438 462 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 RPL31P3-201ENST00000458430 332 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 UBL5P3-201ENST00000475112 231 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 AL163973.1-201ENST00000484753 577 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 RNU1-92P-201ENST00000517017 135 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 CENPUP1-201ENST00000526649 1202 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 AL512310.8-201ENST00000550183 120 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 EIF4A1P12-201ENST00000551910 141 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 CTHRC1P1-201ENST00000605383 469 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 AL355802.3-201ENST00000607571 545 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 AL365434.2-201ENST00000607979 234 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 TUSC7.1-201ENST00000610969 165 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 AL450472.1-202ENST00000637286 180 ntBASIC1.02□□□□□ -2.25
VCX3AQ9NNX9 ZNF209P-201ENST00000593450 2304 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 AC106754.1-201ENST00000562632 1513 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 U8.13-201ENST00000390842 128 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 MTCO1P21-201ENST00000416634 589 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 TAF9P1-201ENST00000445421 515 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 MTCYBP1-201ENST00000454315 1119 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 TAF9P2-201ENST00000454958 515 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 snoU13.27-201ENST00000459278 104 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 AC091874.1-201ENST00000511402 339 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 MTATP6P9-201ENST00000515039 680 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 RNU7-40P-201ENST00000516397 64 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 RNU2-46P-201ENST00000517038 113 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 RNA5SP404-201ENST00000517118 132 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 AC109479.2-201ENST00000517842 174 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 AC090572.1-201ENST00000519251 160 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 MTND1P8-201ENST00000571424 950 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 MIR3660-201ENST00000584845 100 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 MZT1P2-201ENST00000604387 248 ntBASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
VCX3AQ9NNX9 U8.2-201ENST00000363156 134 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 Y_RNA.367-201ENST00000365544 101 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 RPL37P10-201ENST00000412884 288 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1□□□□□ -2.25
VCX3AQ9NNX9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1□□□□□ -2.25
VCX3AQ9NNX9 AL133396.1-201ENST00000432048 687 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 SNAP23P1-201ENST00000433229 246 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1□□□□□ -2.25
VCX3AQ9NNX9 AC073910.1-201ENST00000445047 438 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 AC007395.1-201ENST00000451333 677 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 ZNF114P1-201ENST00000453500 292 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 AL162395.1-201ENST00000457882 422 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1□□□□□ -2.25
VCX3AQ9NNX9 ELOCP32-201ENST00000548625 324 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1□□□□□ -2.25
VCX3AQ9NNX9 AP005136.1-201ENST00000579765 429 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 AC008751.2-201ENST00000597885 980 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 AC073413.2-201ENST00000604332 360 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 AC126177.8-201ENST00000618339 1015 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 U6.114-201ENST00000636407 96 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 MTND5P17-201ENST00000418405 1603 ntBASIC1□□□□□ -2.25
VCX3AQ9NNX9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 RNU6-552P-201ENST00000362869 119 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 RNU1-76P-201ENST00000362903 159 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 RNU6-1287P-201ENST00000362914 107 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 SNORA4.2-201ENST00000365313 147 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 RNU6-877P-201ENST00000383868 107 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 SNORA36A-201ENST00000384221 132 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 Y_RNA.510-201ENST00000384511 114 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 RNU6-1060P-201ENST00000384664 107 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 RPS29P13-201ENST00000402041 169 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AC004965.1-201ENST00000413033 213 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AC060773.1-201ENST00000421698 310 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 SNX2P2-201ENST00000424553 323 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 RPL23AP95-201ENST00000426806 265 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 MTCO3P29-201ENST00000432119 779 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AC132479.1-201ENST00000449160 144 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 MTND3P3-201ENST00000505004 126 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 MTCO3P7-201ENST00000510008 774 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AL161670.1-201ENST00000554348 137 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 Z98751.3-201ENST00000604447 521 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AL645939.4-201ENST00000604495 135 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AP000240.1-201ENST00000609910 452 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AL133173.2-201ENST00000614270 90 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AC008147.4-201ENST00000617570 1204 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AC022306.3-201ENST00000619930 550 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 MIR8065-201ENST00000620577 100 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AL078595.3-201ENST00000623815 1166 ntBASIC0.99□□□□□ -2.25
VCX3AQ9NNX9 AC092268.1-201ENST00000342691 405 ntBASIC0.98□□□□□ -2.25
VCX3AQ9NNX9 SNORD114-1-201ENST00000362705 72 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms