Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.52□□□□□ -2.01
BRF2Q9HAW0 RNA5SP282-201ENST00000516355 108 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 SNORA31.16-201ENST00000516773 139 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC018630.3-201ENST00000542637 96 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC079600.2-201ENST00000550076 130 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC060766.3-201ENST00000591442 263 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 AC099654.5-201ENST00000636479 350 ntBASIC2.52□□□□□ -2.01
BRF2Q9HAW0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
BRF2Q9HAW0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.51□□□□□ -2.01
BRF2Q9HAW0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
BRF2Q9HAW0 RNU6-593P-201ENST00000364716 112 ntBASIC2.51□□□□□ -2.01
BRF2Q9HAW0 RNU6-601P-201ENST00000384540 107 ntBASIC2.51□□□□□ -2.01
BRF2Q9HAW0 RNU6-1009P-201ENST00000390996 107 ntBASIC2.51□□□□□ -2.01
BRF2Q9HAW0 AL356432.1-201ENST00000405809 419 ntBASIC2.51□□□□□ -2.01
BRF2Q9HAW0 CBX3P6-201ENST00000430257 527 ntBASIC2.51□□□□□ -2.01
BRF2Q9HAW0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.51□□□□□ -2.01
BRF2Q9HAW0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.51□□□□□ -2.01
BRF2Q9HAW0 Y_RNA.635-201ENST00000459041 101 ntBASIC2.51□□□□□ -2.01
BRF2Q9HAW0 SRIP1-201ENST00000489235 288 ntBASIC2.51□□□□□ -2.01
BRF2Q9HAW0 RNU6-1016P-201ENST00000516689 94 ntBASIC2.51□□□□□ -2.01
BRF2Q9HAW0 SNORA31.15-201ENST00000516771 132 ntBASIC2.51□□□□□ -2.01
BRF2Q9HAW0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.51□□□□□ -2.01
BRF2Q9HAW0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.51□□□□□ -2.01
BRF2Q9HAW0 MIR3923-201ENST00000579521 83 ntBASIC2.51□□□□□ -2.01
BRF2Q9HAW0 ELOCP29-201ENST00000588193 334 ntBASIC2.51□□□□□ -2.01
BRF2Q9HAW0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
BRF2Q9HAW0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
BRF2Q9HAW0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 AC233981.2-201ENST00000611524 1614 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 RNA5SP393-201ENST00000363423 117 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 SNORA70.4-201ENST00000365509 134 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 MIR491-201ENST00000384877 84 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 USP9YP30-201ENST00000430729 455 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 MTATP6P23-201ENST00000440153 476 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 AL353705.4-201ENST00000449661 238 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 RNU1-104P-201ENST00000517280 175 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 AC109446.1-201ENST00000566172 220 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 MIR4446-201ENST00000578505 67 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 MIR5194-201ENST00000582634 120 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 PISRT1.1-201ENST00000616930 107 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 AC092794.2-201ENST00000620933 563 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 AP006437.1-201ENST00000641440 3685 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.5□□□□□ -2.01
BRF2Q9HAW0 AC131280.1-202ENST00000624067 4211 ntBASIC2.5□□□□□ -2.01
BRF2Q9HAW0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
BRF2Q9HAW0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
BRF2Q9HAW0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
BRF2Q9HAW0 RNU1-52P-201ENST00000384190 164 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 SNORA36A-201ENST00000384221 132 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 RNA5SP210-201ENST00000391034 120 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 AL356057.3-201ENST00000402607 340 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 AL591034.2-201ENST00000402839 359 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 RNA5SP494-201ENST00000410653 129 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.49□□□□□ -2.01
BRF2Q9HAW0 FTH1P25-201ENST00000447665 469 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 AL139109.1-201ENST00000455491 297 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 MTND4P17-201ENST00000470444 350 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 AC145146.1-201ENST00000496370 254 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 AC091951.2-201ENST00000500762 203 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.49□□□□□ -2.01
BRF2Q9HAW0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.49□□□□□ -2.01
BRF2Q9HAW0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 Y_RNA.691-201ENST00000516611 103 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 FGF7P1-201ENST00000582820 288 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 7SK.7-201ENST00000603504 247 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 AL008636.1-201ENST00000625038 1018 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 SNORA43.4-201ENST00000629559 138 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 AL137790.1-201ENST00000634283 177 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 FO624990.1-201ENST00000636373 85 ntBASIC2.49□□□□□ -2.01
BRF2Q9HAW0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
BRF2Q9HAW0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
BRF2Q9HAW0 RNU6-859P-201ENST00000362728 107 ntBASIC2.48□□□□□ -2.01
BRF2Q9HAW0 RNU1-23P-201ENST00000363361 144 ntBASIC2.48□□□□□ -2.01
BRF2Q9HAW0 SNORA25B-201ENST00000365507 128 ntBASIC2.48□□□□□ -2.01
BRF2Q9HAW0 RNU6-546P-201ENST00000383991 107 ntBASIC2.48□□□□□ -2.01
BRF2Q9HAW0 SNORA9-201ENST00000384215 133 ntBASIC2.48□□□□□ -2.01
BRF2Q9HAW0 RNU6-784P-201ENST00000384330 106 ntBASIC2.48□□□□□ -2.01
BRF2Q9HAW0 Y_RNA.482-201ENST00000384377 111 ntBASIC2.48□□□□□ -2.01
BRF2Q9HAW0 MIR128-1-201ENST00000384921 82 ntBASIC2.48□□□□□ -2.01
BRF2Q9HAW0 MIR524-201ENST00000385242 87 ntBASIC2.48□□□□□ -2.01
BRF2Q9HAW0 MIR208B-201ENST00000401172 77 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms