Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.47□□□□□ -1.69
EFCC1Q9HA90 HSPE1P4-201ENST00000550617 308 ntBASIC4.47□□□□□ -1.69
EFCC1Q9HA90 TRAV28-201ENST00000557548 323 ntBASIC4.47□□□□□ -1.69
EFCC1Q9HA90 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.47□□□□□ -1.69
EFCC1Q9HA90 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.47□□□□□ -1.69
EFCC1Q9HA90 AC024581.2-201ENST00000619986 252 ntBASIC4.47□□□□□ -1.69
EFCC1Q9HA90 MIR6852-201ENST00000621699 66 ntBASIC4.47□□□□□ -1.69
EFCC1Q9HA90 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
EFCC1Q9HA90 USP8P1-201ENST00000494673 3183 ntBASIC4.47□□□□□ -1.69
EFCC1Q9HA90 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
EFCC1Q9HA90 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
EFCC1Q9HA90 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
EFCC1Q9HA90 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
EFCC1Q9HA90 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
EFCC1Q9HA90 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
EFCC1Q9HA90 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
EFCC1Q9HA90 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
EFCC1Q9HA90 AL359693.1-201ENST00000614959 2407 ntBASIC4.46□□□□□ -1.69
EFCC1Q9HA90 Y_RNA.136-201ENST00000363444 102 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.230-201ENST00000364348 109 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 Z98749.2-208ENST00000381646 500 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.441-201ENST00000384123 112 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 RNU6-1145P-201ENST00000384246 107 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 U8.10-201ENST00000384260 133 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 RNU6-140P-201ENST00000384566 108 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 MIR544A-201ENST00000384855 91 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 AL357075.1-201ENST00000404107 726 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 RNU2-2P-201ENST00000410396 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 AC009237.8-201ENST00000445492 379 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.46□□□□□ -1.7
EFCC1Q9HA90 AC055872.1-201ENST00000570978 278 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 RNU2-4P-201ENST00000606190 192 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 U2.15-201ENST00000611544 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 U2.16-201ENST00000613119 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 U2.12-201ENST00000613778 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 U2.9-201ENST00000615427 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 U2.11-201ENST00000616345 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 U2.2-201ENST00000616535 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 U2.3-201ENST00000617785 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 U2.19-201ENST00000618602 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 RNU2-1-201ENST00000618664 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 U2.6-201ENST00000619225 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 U2.5-201ENST00000619465 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 U2.10-201ENST00000620268 191 ntBASIC4.46□□□□□ -1.7
EFCC1Q9HA90 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
EFCC1Q9HA90 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.46□□□□□ -1.7
EFCC1Q9HA90 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.45□□□□□ -1.7
EFCC1Q9HA90 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.45□□□□□ -1.7
EFCC1Q9HA90 RNA5SP50-201ENST00000363731 107 ntBASIC4.45□□□□□ -1.7
EFCC1Q9HA90 RNA5SP51-201ENST00000364750 119 ntBASIC4.45□□□□□ -1.7
EFCC1Q9HA90 RNU6-818P-201ENST00000364837 108 ntBASIC4.45□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.571-201ENST00000384753 98 ntBASIC4.45□□□□□ -1.7
EFCC1Q9HA90 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.45□□□□□ -1.7
EFCC1Q9HA90 BTF3P11-201ENST00000426582 477 ntBASIC4.45□□□□□ -1.7
EFCC1Q9HA90 AL512844.2-201ENST00000433990 593 ntBASIC4.45□□□□□ -1.7
EFCC1Q9HA90 AL162725.1-201ENST00000435405 301 ntBASIC4.45□□□□□ -1.7
EFCC1Q9HA90 RN7SL93P-201ENST00000463035 293 ntBASIC4.45□□□□□ -1.7
EFCC1Q9HA90 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.45□□□□□ -1.7
EFCC1Q9HA90 RNU6-966P-201ENST00000516479 104 ntBASIC4.45□□□□□ -1.7
EFCC1Q9HA90 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.45□□□□□ -1.7
EFCC1Q9HA90 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.45□□□□□ -1.7
EFCC1Q9HA90 AL138963.2-201ENST00000605137 226 ntBASIC4.45□□□□□ -1.7
EFCC1Q9HA90 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.45□□□□□ -1.7
EFCC1Q9HA90 SNORA43.4-201ENST00000629559 138 ntBASIC4.45□□□□□ -1.7
EFCC1Q9HA90 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
EFCC1Q9HA90 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
EFCC1Q9HA90 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
EFCC1Q9HA90 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.217-201ENST00000364214 105 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.435-201ENST00000384095 112 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.568-201ENST00000384742 113 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 MIR490-201ENST00000384865 128 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 MIR549A-201ENST00000385268 96 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 MTHFD2P2-201ENST00000407725 247 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 SNORA3C-201ENST00000408792 125 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.595-201ENST00000410403 105 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 AC083863.1-201ENST00000438811 231 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 AC005042.3-201ENST00000453230 174 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 Y_RNA.641-201ENST00000459414 105 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 RNU6-426P-201ENST00000516464 97 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 SNORD116-25-201ENST00000516517 92 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 AC022695.1-201ENST00000522089 237 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
EFCC1Q9HA90 AC092593.1-201ENST00000515413 1815 ntBASIC4.44□□□□□ -1.7
EFCC1Q9HA90 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
EFCC1Q9HA90 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
EFCC1Q9HA90 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.43□□□□□ -1.7
EFCC1Q9HA90 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms