Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNU6-708P-201ENST00000384217 107 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 RNU6-790P-201ENST00000384479 105 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 Y_RNA.518-201ENST00000384552 113 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 Y_RNA.551-201ENST00000384661 102 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 RNU6-1179P-201ENST00000384667 107 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 SNORA26.7-201ENST00000391288 122 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 MIR1302-6-201ENST00000408466 90 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 RNU6-121P-201ENST00000410525 99 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 RNU6-1025P-201ENST00000410629 104 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 RNU2-52P-201ENST00000410680 190 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 RNU6-130P-201ENST00000411112 103 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 AC063976.3-201ENST00000426849 329 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.95□□□□□ -1.94
EBF3Q9H4W6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.95□□□□□ -1.94
EBF3Q9H4W6 DAP3P1-201ENST00000441522 278 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 PIGFP3-201ENST00000441918 722 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 NDUFB1P2-201ENST00000449477 176 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 MTCO3P8-201ENST00000453691 755 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 MTND4LP30-201ENST00000454092 297 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 RPL30P5-201ENST00000494923 336 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 RNU6-1023P-201ENST00000516137 106 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 Y_RNA.673-201ENST00000516306 88 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 Y_RNA.687-201ENST00000516558 91 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 RNU6-897P-201ENST00000517135 105 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 AC109329.1-201ENST00000518744 317 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.95□□□□□ -1.94
EBF3Q9H4W6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.95□□□□□ -1.94
EBF3Q9H4W6 AC023043.3-201ENST00000593113 385 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 AC136601.2-201ENST00000604356 474 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
EBF3Q9H4W6 AC092435.3-201ENST00000565538 3654 ntBASIC2.95□□□□□ -1.94
EBF3Q9H4W6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
EBF3Q9H4W6 RNU6-770P-201ENST00000363929 105 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 RNU6-384P-201ENST00000364900 104 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 U8.8-201ENST00000365399 135 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF3Q9H4W6 RNU6-1197P-201ENST00000391183 107 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 RNU6-1093P-201ENST00000391194 107 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 MIR887-201ENST00000401258 79 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 SNORD88.1-201ENST00000408684 91 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 RPL21P38-201ENST00000418090 167 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 AC092573.2-201ENST00000434546 243 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 NDUFB4P6-201ENST00000436819 366 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 RPS29P6-201ENST00000438196 145 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF3Q9H4W6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF3Q9H4W6 LINC01399-202ENST00000458450 244 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 SNORD109B-201ENST00000458961 67 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 SNORD109A-201ENST00000459128 67 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 AC025465.3-201ENST00000510570 311 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 MIR892C-201ENST00000516410 77 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 RNU6-1282P-201ENST00000516735 96 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 RNU6-570P-201ENST00000517051 105 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.94□□□□□ -1.94
EBF3Q9H4W6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.94□□□□□ -1.94
EBF3Q9H4W6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.94□□□□□ -1.94
EBF3Q9H4W6 AC012433.1-201ENST00000588916 398 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
EBF3Q9H4W6 AL159153.1-201ENST00000619688 317 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 IGHVIII-44-202ENST00000636235 289 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 AC004944.1-201ENST00000517807 3059 ntBASIC2.94□□□□□ -1.94
EBF3Q9H4W6 RNU6-1317P-201ENST00000364582 104 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 SNORA51.11-201ENST00000384442 131 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 MIR493-201ENST00000385254 89 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.93□□□□□ -1.94
EBF3Q9H4W6 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.93□□□□□ -1.94
EBF3Q9H4W6 HIGD1AP2-201ENST00000446367 280 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.93□□□□□ -1.94
EBF3Q9H4W6 AC098869.1-201ENST00000481627 292 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 RN7SL633P-201ENST00000488974 297 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.93□□□□□ -1.94
EBF3Q9H4W6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.93□□□□□ -1.94
EBF3Q9H4W6 SNORD59.2-201ENST00000516873 68 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 RNU6-111P-201ENST00000517179 105 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 HMGB1P14-201ENST00000557424 591 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.93□□□□□ -1.94
EBF3Q9H4W6 MIR5701-3-201ENST00000578890 82 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 MIR4273-201ENST00000582824 84 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 MIR5701-1-201ENST00000585138 82 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 VN1R91P-201ENST00000594377 169 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 AC004832.5-201ENST00000608677 401 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 MIR5701-2-201ENST00000615634 82 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 FAM35BP-202ENST00000497389 3337 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 AL035425.3-201ENST00000564206 4996 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 AC022336.2-201ENST00000568966 2538 ntBASIC2.93□□□□□ -1.94
EBF3Q9H4W6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.92□□□□□ -1.94
EBF3Q9H4W6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.92□□□□□ -1.94
EBF3Q9H4W6 RNU6-1062P-201ENST00000383908 107 ntBASIC2.92□□□□□ -1.94
EBF3Q9H4W6 MIR196B-201ENST00000384852 84 ntBASIC2.92□□□□□ -1.94
EBF3Q9H4W6 AL513475.1-201ENST00000406602 315 ntBASIC2.92□□□□□ -1.94
EBF3Q9H4W6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.92□□□□□ -1.94
EBF3Q9H4W6 AL451074.5-201ENST00000415894 435 ntBASIC2.92□□□□□ -1.94
EBF3Q9H4W6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.92□□□□□ -1.94
EBF3Q9H4W6 RNU6-138P-201ENST00000515952 107 ntBASIC2.92□□□□□ -1.94
EBF3Q9H4W6 ACA59.1-201ENST00000515966 143 ntBASIC2.92□□□□□ -1.94
EBF3Q9H4W6 RNA5SP165-201ENST00000517142 115 ntBASIC2.92□□□□□ -1.94
EBF3Q9H4W6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.92□□□□□ -1.94
EBF3Q9H4W6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms