Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNU6-256P-201ENST00000516747 97 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.69□□□□□ -1.98
USP44Q9H0E7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.69□□□□□ -1.98
USP44Q9H0E7 AC026371.1-201ENST00000551867 419 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 SCOCP1-201ENST00000554676 349 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 AL121579.1-201ENST00000555129 305 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 AC090616.3-201ENST00000582184 217 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 AL022345.1-201ENST00000607292 135 ntBASIC2.69□□□□□ -1.98
USP44Q9H0E7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.69□□□□□ -1.98
USP44Q9H0E7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
USP44Q9H0E7 RNU6-428P-201ENST00000362942 107 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 MIR544A-201ENST00000384855 91 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.68□□□□□ -1.98
USP44Q9H0E7 SNAP23P1-201ENST00000433229 246 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.68□□□□□ -1.98
USP44Q9H0E7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
USP44Q9H0E7 MTND3P10-201ENST00000450967 341 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.68□□□□□ -1.98
USP44Q9H0E7 AC008628.2-201ENST00000502605 298 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 AC092436.3-201ENST00000511788 257 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.68□□□□□ -1.98
USP44Q9H0E7 AC016256.1-201ENST00000547971 354 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.68□□□□□ -1.98
USP44Q9H0E7 MIR4742-201ENST00000581069 85 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 MIR3136-201ENST00000583498 78 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 AC064836.2-201ENST00000609491 462 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 AL138726.1-201ENST00000614873 333 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 AC022306.2-201ENST00000617563 647 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 U4atac.1-201ENST00000618345 95 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 MIR6873-201ENST00000622788 63 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.68□□□□□ -1.98
USP44Q9H0E7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.68□□□□□ -1.98
USP44Q9H0E7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
USP44Q9H0E7 RNU6-845P-201ENST00000362578 103 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 Y_RNA.301-201ENST00000364990 103 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 MIR95-201ENST00000385072 81 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 SNORA11.4-201ENST00000408823 129 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 RNU2-2P-201ENST00000410396 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 RN7SKP61-201ENST00000410642 295 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 RN7SKP284-201ENST00000411002 343 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 MTND3P8-201ENST00000412909 339 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.67□□□□□ -1.98
USP44Q9H0E7 OOSP1P1-201ENST00000423265 274 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 AL353572.1-201ENST00000442490 417 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 MTND4P18-201ENST00000447010 465 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 AL121594.1-201ENST00000475906 575 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 MTCO1P29-201ENST00000496868 288 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 RNU6-1088P-201ENST00000516850 104 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 AC103996.1-201ENST00000555468 102 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 AC005730.3-201ENST00000583067 366 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 ELOCP5-201ENST00000604924 333 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 AC116312.1-201ENST00000606841 314 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 U2.15-201ENST00000611544 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 U2.16-201ENST00000613119 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 U2.12-201ENST00000613778 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 U2.20-201ENST00000613956 192 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 U2.9-201ENST00000615427 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 U2.11-201ENST00000616345 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 U2.2-201ENST00000616535 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 U2.3-201ENST00000617785 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 U2.19-201ENST00000618602 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 RNU2-1-201ENST00000618664 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 U2.6-201ENST00000619225 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 U2.5-201ENST00000619465 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 U2.10-201ENST00000620268 191 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.67□□□□□ -1.98
USP44Q9H0E7 AL133216.2-202ENST00000634512 349 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.67□□□□□ -1.98
USP44Q9H0E7 AC092268.1-201ENST00000342691 405 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 RNU6-1285P-201ENST00000363480 105 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 MIR29B2-201ENST00000385055 81 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.66□□□□□ -1.98
USP44Q9H0E7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.66□□□□□ -1.98
USP44Q9H0E7 PDCL2P1-201ENST00000419302 352 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.66□□□□□ -1.98
USP44Q9H0E7 CR769767.1-201ENST00000436337 346 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 AC098614.3-201ENST00000438957 440 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 MTND4LP16-201ENST00000440828 295 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USP44Q9H0E7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.66□□□□□ -1.98
USP44Q9H0E7 AC073901.1-201ENST00000462471 408 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 CKS1BP2-201ENST00000497342 240 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 AC096745.1-201ENST00000509945 370 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 AC046134.1-201ENST00000514454 666 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 RNU6-273P-201ENST00000516937 96 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.66□□□□□ -1.98
USP44Q9H0E7 AC104576.1-201ENST00000524225 88 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 AC023043.2-201ENST00000589678 1026 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 RPL30P11-203ENST00000598995 310 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 AP001836.1-201ENST00000604675 523 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 AC104237.2-201ENST00000612456 443 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 MIR219B-201ENST00000637023 88 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 AC241585.2-209ENST00000638217 143 ntBASIC2.66□□□□□ -1.98
USP44Q9H0E7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.66□□□□□ -1.98
USP44Q9H0E7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
USP44Q9H0E7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
USP44Q9H0E7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
USP44Q9H0E7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
USP44Q9H0E7 MTND4P23-201ENST00000447723 1363 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms