Protein–RNA interactions for Protein: Q9GZU3

TMEM39B, Transmembrane protein 39B, humanhuman

Predictions only

Length 492 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39BQ9GZU3 MTND5P30-201ENST00000452896 1731 ntBASIC2.54□□□□□ -2
TMEM39BQ9GZU3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TMEM39BQ9GZU3 MTND4P23-201ENST00000447723 1363 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.53□□□□□ -2
TMEM39BQ9GZU3 RNA5SP390-201ENST00000410191 113 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AL030996.1-201ENST00000411430 235 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.53□□□□□ -2
TMEM39BQ9GZU3 PDCL2P1-201ENST00000419302 352 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 MTND3P9-201ENST00000429526 346 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 MTATP6P23-201ENST00000440153 476 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AC124916.1-201ENST00000444020 547 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AL031659.1-201ENST00000447075 539 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AC130509.1-201ENST00000464158 433 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 RPL22P13-201ENST00000493291 347 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 CKS1BP2-201ENST00000497342 240 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 RPS27P27-201ENST00000498779 255 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AC046134.1-201ENST00000514454 666 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 RNA5SP454-201ENST00000517231 127 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.53□□□□□ -2
TMEM39BQ9GZU3 MIR4790-201ENST00000577799 79 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AC090616.3-201ENST00000582184 217 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AC022306.2-201ENST00000617563 647 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.53□□□□□ -2
TMEM39BQ9GZU3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AC138915.1-201ENST00000565427 1685 ntBASIC2.53□□□□□ -2
TMEM39BQ9GZU3 AC026241.1-201ENST00000517873 2142 ntBASIC2.53□□□□□ -2.01
TMEM39BQ9GZU3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 Z82195.2-201ENST00000612348 18351 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 RNU6-212P-201ENST00000362642 104 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 Y_RNA.135-201ENST00000363439 95 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 RNU6-461P-201ENST00000364195 107 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 SNORD81.2-201ENST00000365153 76 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 RPL21P75-201ENST00000396599 483 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 RPL21P28-201ENST00000401418 483 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AL513475.1-201ENST00000406602 315 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 CYCSP49-201ENST00000420810 319 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 RPL30P4-201ENST00000429309 333 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 MTND4P18-201ENST00000447010 465 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 RPL21P39-201ENST00000463605 483 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 RN7SL499P-201ENST00000481141 276 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AC087190.1-201ENST00000484462 480 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AC140059.1-201ENST00000489238 361 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AC093591.1-201ENST00000491435 481 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 RPL21P16-201ENST00000495531 483 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AC103851.1-201ENST00000506833 274 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 RNA5SP112-201ENST00000515937 99 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 RNU6-507P-201ENST00000516045 100 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 RNU6-612P-201ENST00000516909 102 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AC079598.5-201ENST00000547460 117 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AC005668.1-201ENST00000571142 476 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 MTCO3P13-201ENST00000577757 781 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 BNIP3P16-201ENST00000589779 534 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AL355073.2-201ENST00000612106 557 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 AC002543.1-201ENST00000299783 1954 ntBASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.52□□□□□ -2.01
TMEM39BQ9GZU3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 Y_RNA.40-201ENST00000362645 93 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 Y_RNA.184-201ENST00000363884 108 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 RNU6-487P-201ENST00000365430 104 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 RNU6-306P-201ENST00000384617 107 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 MIR627-201ENST00000384979 97 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 FO393413.1-201ENST00000402892 195 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 Z82205.1-201ENST00000428456 297 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 AC073901.1-201ENST00000462471 408 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 AC023141.11-201ENST00000508864 202 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 RNA5SP458-201ENST00000516188 119 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 SCARNA3-201ENST00000517097 143 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 AP005639.2-201ENST00000527592 928 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 MIR3976-201ENST00000606807 139 ntBASIC2.51□□□□□ -2.01
TMEM39BQ9GZU3 AC010329.5-201ENST00000623497 2174 ntBASIC2.5□□□□□ -2.01
TMEM39BQ9GZU3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TMEM39BQ9GZU3 RNU6-486P-201ENST00000363116 107 ntBASIC2.5□□□□□ -2.01
TMEM39BQ9GZU3 RNU6-790P-201ENST00000384479 105 ntBASIC2.5□□□□□ -2.01
TMEM39BQ9GZU3 MIR521-1-201ENST00000384902 87 ntBASIC2.5□□□□□ -2.01
TMEM39BQ9GZU3 RNA5SP213-201ENST00000391031 106 ntBASIC2.5□□□□□ -2.01
TMEM39BQ9GZU3 MIR548F5-201ENST00000408421 86 ntBASIC2.5□□□□□ -2.01
TMEM39BQ9GZU3 RNA5SP492-201ENST00000411330 114 ntBASIC2.5□□□□□ -2.01
TMEM39BQ9GZU3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms