Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CPNE1Q99829 SNORA11.1-201ENST00000408133 129 ntBASIC2.21□□□□□ -2.06
CPNE1Q99829 RNU6-325P-201ENST00000411132 105 ntBASIC2.21□□□□□ -2.06
CPNE1Q99829 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.21□□□□□ -2.06
CPNE1Q99829 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.21□□□□□ -2.06
CPNE1Q99829 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.21□□□□□ -2.06
CPNE1Q99829 RPS29P27-201ENST00000463711 170 ntBASIC2.21□□□□□ -2.06
CPNE1Q99829 HMGB3P3-201ENST00000510526 400 ntBASIC2.21□□□□□ -2.06
CPNE1Q99829 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.21□□□□□ -2.06
CPNE1Q99829 AC091874.1-201ENST00000511402 339 ntBASIC2.21□□□□□ -2.06
CPNE1Q99829 AP003033.1-201ENST00000527244 415 ntBASIC2.21□□□□□ -2.06
CPNE1Q99829 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.21□□□□□ -2.06
CPNE1Q99829 AC121758.2-201ENST00000553271 193 ntBASIC2.21□□□□□ -2.06
CPNE1Q99829 AC021231.3-201ENST00000558497 370 ntBASIC2.21□□□□□ -2.06
CPNE1Q99829 AC146944.4-201ENST00000602697 718 ntBASIC2.21□□□□□ -2.06
CPNE1Q99829 SNORD14A-201ENST00000606526 91 ntBASIC2.21□□□□□ -2.06
CPNE1Q99829 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.21□□□□□ -2.06
CPNE1Q99829 MIR203B-201ENST00000636080 86 ntBASIC2.21□□□□□ -2.06
CPNE1Q99829 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CPNE1Q99829 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CPNE1Q99829 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CPNE1Q99829 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.2□□□□□ -2.06
CPNE1Q99829 RNU4-15P-201ENST00000362613 141 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 RNU6-944P-201ENST00000364023 107 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 RNU1-91P-201ENST00000364746 163 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 RNU6-546P-201ENST00000383991 107 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 MIR524-201ENST00000385242 87 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 RNU2-32P-201ENST00000411193 191 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 EIF1AXP1-201ENST00000419267 435 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 MTND3P9-201ENST00000429526 346 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 CBX3P6-201ENST00000430257 527 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 MTATP6P13-201ENST00000438531 667 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 GPM6BP3-201ENST00000442797 145 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 AC018868.1-201ENST00000491307 315 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 AC104564.1-201ENST00000493028 407 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.2□□□□□ -2.06
CPNE1Q99829 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.2□□□□□ -2.06
CPNE1Q99829 RNA5SP200-201ENST00000516360 103 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 RNU6-567P-201ENST00000516746 107 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 SNORA31.16-201ENST00000516773 139 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 AC118273.2-201ENST00000532092 465 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.2□□□□□ -2.06
CPNE1Q99829 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.2□□□□□ -2.06
CPNE1Q99829 MIR5694-201ENST00000581190 76 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 AC023043.2-201ENST00000589678 1026 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.2□□□□□ -2.06
CPNE1Q99829 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.2□□□□□ -2.06
CPNE1Q99829 AC093913.1-201ENST00000614178 329 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 AC063943.3-201ENST00000615562 356 ntBASIC2.2□□□□□ -2.06
CPNE1Q99829 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CPNE1Q99829 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.2□□□□□ -2.06
CPNE1Q99829 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CPNE1Q99829 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.19□□□□□ -2.06
CPNE1Q99829 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CPNE1Q99829 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CPNE1Q99829 RNU6-562P-201ENST00000362731 107 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 Y_RNA.135-201ENST00000363439 95 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CPNE1Q99829 RNU6-1013P-201ENST00000384180 107 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 MIR221-201ENST00000385135 110 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CPNE1Q99829 Y_RNA.597-201ENST00000410463 100 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 Z92545.1-201ENST00000411782 234 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.19□□□□□ -2.06
CPNE1Q99829 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.19□□□□□ -2.06
CPNE1Q99829 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.19□□□□□ -2.06
CPNE1Q99829 USP9YP28-201ENST00000435142 589 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 NFU1P2-201ENST00000448700 469 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 AC145146.1-201ENST00000496370 254 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.19□□□□□ -2.06
CPNE1Q99829 RNU6-864P-201ENST00000516256 108 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 AC034114.1-201ENST00000520293 285 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 AF235103.2-201ENST00000525753 346 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 AC022616.8-201ENST00000533569 253 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 AC016256.1-201ENST00000547971 354 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 MIR3126-201ENST00000577443 74 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 MIR3923-201ENST00000579521 83 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 CPDP1-201ENST00000579660 283 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 MIR3672-201ENST00000584290 82 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 MIR6132-201ENST00000622083 109 ntBASIC2.19□□□□□ -2.06
CPNE1Q99829 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.19□□□□□ -2.06
CPNE1Q99829 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CPNE1Q99829 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.19□□□□□ -2.06
CPNE1Q99829 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CPNE1Q99829 MIR483-201ENST00000385070 76 ntBASIC2.18□□□□□ -2.06
CPNE1Q99829 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.18□□□□□ -2.06
CPNE1Q99829 RPL23AP83-201ENST00000434984 473 ntBASIC2.18□□□□□ -2.06
CPNE1Q99829 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CPNE1Q99829 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.18□□□□□ -2.06
CPNE1Q99829 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.18□□□□□ -2.06
CPNE1Q99829 RNA5SP281-201ENST00000516504 135 ntBASIC2.18□□□□□ -2.06
CPNE1Q99829 NDUFA5P6-201ENST00000542110 379 ntBASIC2.18□□□□□ -2.06
CPNE1Q99829 MIR5002-201ENST00000584713 97 ntBASIC2.18□□□□□ -2.06
CPNE1Q99829 AC018638.8-201ENST00000588755 281 ntBASIC2.18□□□□□ -2.06
CPNE1Q99829 AC078795.3-201ENST00000602913 472 ntBASIC2.18□□□□□ -2.06
CPNE1Q99829 AL133215.3-201ENST00000609801 448 ntBASIC2.18□□□□□ -2.06
CPNE1Q99829 MIR8076-201ENST00000611401 83 ntBASIC2.18□□□□□ -2.06
CPNE1Q99829 AC245884.12-201ENST00000615364 59 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms