Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.92□□□□□ -1.94
SNX18Q96RF0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SNX18Q96RF0 RBBP8P1-201ENST00000449447 1844 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 Y_RNA.152-201ENST00000363578 100 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 SNORA38.1-201ENST00000364172 131 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 RNU4-9P-201ENST00000364951 139 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 RNU6-750P-201ENST00000390946 107 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 RNU1-101P-201ENST00000391171 127 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 AL357075.1-201ENST00000404107 726 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 RNA5SP120-201ENST00000410900 112 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 Z92545.1-201ENST00000411782 234 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 AC114482.1-201ENST00000418010 247 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX18Q96RF0 AP001025.1-201ENST00000486139 332 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 RPL23AP75-201ENST00000491601 451 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.92□□□□□ -1.94
SNX18Q96RF0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.92□□□□□ -1.94
SNX18Q96RF0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SNX18Q96RF0 AC004817.2-201ENST00000561794 651 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 AC025281.1-201ENST00000567026 265 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX18Q96RF0 AC010928.2-201ENST00000588017 287 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 AC006006.1-201ENST00000603082 144 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 AC107871.2-201ENST00000612894 502 ntBASIC2.92□□□□□ -1.94
SNX18Q96RF0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.92□□□□□ -1.94
SNX18Q96RF0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SNX18Q96RF0 Z83843.1-201ENST00000604070 3685 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 AC103988.1-201ENST00000566382 2177 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SNX18Q96RF0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SNX18Q96RF0 SNORA14A-201ENST00000364773 135 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 RNU6-1286P-201ENST00000383871 107 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 Y_RNA.401-201ENST00000383965 117 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 Y_RNA.504-201ENST00000384481 104 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 Y_RNA.526-201ENST00000384572 110 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 U3.19-201ENST00000390893 196 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 MTCO3P19-201ENST00000415864 321 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 AC096649.2-201ENST00000416186 393 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX18Q96RF0 AC005326.1-201ENST00000429197 123 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX18Q96RF0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX18Q96RF0 DYNLT3P2-201ENST00000442517 295 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 AC009296.1-201ENST00000443146 155 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX18Q96RF0 snoU13.30-201ENST00000458951 104 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.91□□□□□ -1.94
SNX18Q96RF0 AF186996.7-201ENST00000492781 209 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 AC104564.1-201ENST00000493028 407 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 RNU6-397P-201ENST00000516226 104 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 RNU6-911P-201ENST00000516523 104 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 RN7SKP57-201ENST00000517248 293 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.91□□□□□ -1.94
SNX18Q96RF0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.91□□□□□ -1.94
SNX18Q96RF0 HSPE1P4-201ENST00000550617 308 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX18Q96RF0 RPS29P30-201ENST00000600975 111 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.91□□□□□ -1.94
SNX18Q96RF0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX18Q96RF0 RAC1P9-201ENST00000604990 392 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 AL356157.2-201ENST00000605122 111 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 SCARNA4-201ENST00000629045 128 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SNX18Q96RF0 AP000560.1-201ENST00000624150 1937 ntBASIC2.91□□□□□ -1.94
SNX18Q96RF0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SNX18Q96RF0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SNX18Q96RF0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SNX18Q96RF0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SNX18Q96RF0 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SNX18Q96RF0 RNU4-50P-201ENST00000364361 141 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 RNU6-702P-201ENST00000364982 107 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 RNU6-748P-201ENST00000384648 107 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 Y_RNA.551-201ENST00000384661 102 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 MIR147B-201ENST00000390185 80 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 AL133475.1-201ENST00000404414 305 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 RNA5SP390-201ENST00000410191 113 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 EIF1AXP1-201ENST00000419267 435 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 RPL23AP95-201ENST00000426806 265 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 AL365496.1-201ENST00000426885 215 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX18Q96RF0 AL731563.1-201ENST00000442202 214 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 OSTCP8-201ENST00000445117 448 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 AL441985.1-201ENST00000457727 251 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 U8.22-201ENST00000459141 133 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 RPL30P12-201ENST00000474666 353 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.9□□□□□ -1.95
SNX18Q96RF0 SNORD59.2-201ENST00000516873 68 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 CKS1BP7-201ENST00000522230 235 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 AC090517.1-201ENST00000569307 266 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 MIR4276-201ENST00000584832 70 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 AL390123.1-201ENST00000603216 237 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 RPL23AP88-201ENST00000605759 454 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.9□□□□□ -1.95
SNX18Q96RF0 AL159153.1-201ENST00000619688 317 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 AC007792.1-201ENST00000623023 402 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 SNORA43.4-201ENST00000629559 138 ntBASIC2.9□□□□□ -1.95
SNX18Q96RF0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms