Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC073346.2-201ENST00000624724 2058 ntBASIC4.76□□□□□ -1.65
TRIM47Q96LD4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM47Q96LD4 RNA5SP56-201ENST00000410277 118 ntBASIC4.76□□□□□ -1.65
TRIM47Q96LD4 RN7SKP53-201ENST00000411337 315 ntBASIC4.76□□□□□ -1.65
TRIM47Q96LD4 AC112220.1-201ENST00000434628 355 ntBASIC4.76□□□□□ -1.65
TRIM47Q96LD4 AL590399.6-201ENST00000446396 307 ntBASIC4.76□□□□□ -1.65
TRIM47Q96LD4 AC006445.2-201ENST00000510061 472 ntBASIC4.76□□□□□ -1.65
TRIM47Q96LD4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.76□□□□□ -1.65
TRIM47Q96LD4 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.76□□□□□ -1.65
TRIM47Q96LD4 AC015813.4-201ENST00000610469 179 ntBASIC4.76□□□□□ -1.65
TRIM47Q96LD4 SNORA43.4-201ENST00000629559 138 ntBASIC4.76□□□□□ -1.65
TRIM47Q96LD4 MIR3674-201ENST00000636576 68 ntBASIC4.76□□□□□ -1.65
TRIM47Q96LD4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM47Q96LD4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM47Q96LD4 Z73965.1-201ENST00000623412 2297 ntBASIC4.76□□□□□ -1.65
TRIM47Q96LD4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TRIM47Q96LD4 AL136360.1-201ENST00000503377 1900 ntBASIC4.76□□□□□ -1.65
TRIM47Q96LD4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 AC011266.1-201ENST00000624119 3569 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 AL139811.1-201ENST00000424779 2299 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 MIR494-201ENST00000349529 81 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 Y_RNA.179-201ENST00000363844 90 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 Y_RNA.220-201ENST00000364244 109 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 RPL21P17-201ENST00000397467 475 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 HSPE1P12-201ENST00000412576 301 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 AC074117.2-201ENST00000417130 397 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 FABP5P15-201ENST00000453566 214 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 RPS29P19-201ENST00000479709 171 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 AL031274.2-201ENST00000599419 203 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 AC009831.4-201ENST00000620744 325 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 AC116096.1-201ENST00000566804 2314 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.75□□□□□ -1.65
TRIM47Q96LD4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.75□□□□□ -1.65
TRIM47Q96LD4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 MTND5P18-201ENST00000445624 1801 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 RNU6-1205P-201ENST00000363625 106 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 RNU5F-3P-201ENST00000363767 117 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 RNU6-1124P-201ENST00000384169 107 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 RNU6-882P-201ENST00000391025 103 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 AL512633.1-201ENST00000399931 655 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 MIR1302-5-201ENST00000408164 150 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 AC096649.2-201ENST00000416186 393 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 RPL31P13-201ENST00000484151 370 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 RN7SKP277-201ENST00000516895 283 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 RNU2-12P-201ENST00000517216 168 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 AC022790.1-201ENST00000522872 204 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 AC006064.5-201ENST00000541782 248 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 AC016256.1-201ENST00000547971 354 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 MIR5688-201ENST00000580619 83 ntBASIC4.74□□□□□ -1.65
TRIM47Q96LD4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM47Q96LD4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM47Q96LD4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM47Q96LD4 U8.11-201ENST00000384699 133 ntBASIC4.73□□□□□ -1.65
TRIM47Q96LD4 U8.12-201ENST00000384701 133 ntBASIC4.73□□□□□ -1.65
TRIM47Q96LD4 RNU6-440P-201ENST00000390882 105 ntBASIC4.73□□□□□ -1.65
TRIM47Q96LD4 RNU6-972P-201ENST00000391208 107 ntBASIC4.73□□□□□ -1.65
TRIM47Q96LD4 RN7SKP156-201ENST00000410308 342 ntBASIC4.73□□□□□ -1.65
TRIM47Q96LD4 RNA5SP475-201ENST00000410568 110 ntBASIC4.73□□□□□ -1.65
TRIM47Q96LD4 AC243964.1-201ENST00000441814 261 ntBASIC4.73□□□□□ -1.65
TRIM47Q96LD4 U8.18-201ENST00000459285 133 ntBASIC4.73□□□□□ -1.65
TRIM47Q96LD4 RNA5SP154-201ENST00000516193 111 ntBASIC4.73□□□□□ -1.65
TRIM47Q96LD4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM47Q96LD4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.73□□□□□ -1.65
TRIM47Q96LD4 MIR432-201ENST00000606207 94 ntBASIC4.73□□□□□ -1.65
TRIM47Q96LD4 SCARNA4-202ENST00000625402 129 ntBASIC4.73□□□□□ -1.65
TRIM47Q96LD4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM47Q96LD4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM47Q96LD4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM47Q96LD4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TRIM47Q96LD4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM47Q96LD4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM47Q96LD4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TRIM47Q96LD4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM47Q96LD4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM47Q96LD4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms