Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 MTND5P30-201ENST00000452896 1731 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 AL109809.4-201ENST00000603520 2185 ntBASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.18□□□□□ -1.9
CDK5RAP3Q96JB5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-1115P-201ENST00000362490 106 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-490P-201ENST00000362985 107 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 Y_RNA.395-201ENST00000383945 109 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 Y_RNA.463-201ENST00000384271 102 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 MIR128-1-201ENST00000384921 82 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 MIR548P-201ENST00000408336 84 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 RNU2-23P-201ENST00000410545 195 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 EIF1AXP1-201ENST00000419267 435 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 AC244670.1-201ENST00000436879 112 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 MTCYBP6-201ENST00000441810 138 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 S100A11P2-201ENST00000467589 312 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 RPL17P19-201ENST00000489069 552 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 AC016632.1-201ENST00000503994 196 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-976P-201ENST00000516086 111 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-699P-201ENST00000517081 110 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 SNRPGP18-201ENST00000553000 214 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 uc_338.22-201ENST00000622722 187 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 AC099654.10-201ENST00000640395 161 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 AC233981.2-201ENST00000611524 1614 ntBASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDK5RAP3Q96JB5 AC092593.1-201ENST00000515413 1815 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-1010P-201ENST00000362757 107 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-529P-201ENST00000363383 104 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 Y_RNA.132-201ENST00000363421 102 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-595P-201ENST00000363944 107 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-142P-201ENST00000384019 107 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 SNORA44-201ENST00000384584 132 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-308P-201ENST00000390957 107 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 UBA52P6-201ENST00000399822 382 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 RNU6-1328P-201ENST00000410938 106 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 AL445687.1-201ENST00000439946 251 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 GPM6BP3-201ENST00000442797 145 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 AL353705.4-201ENST00000449661 238 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 AL513124.1-201ENST00000450410 614 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 Y_RNA.661-201ENST00000516003 99 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 AC020661.2-201ENST00000560114 134 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 MIR3171-201ENST00000584270 74 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 MIR4765-201ENST00000585007 77 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 ZNF861P-201ENST00000588126 639 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 AL359198.2-201ENST00000611836 194 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 SNORA43.4-201ENST00000629559 138 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 AL359854.1-201ENST00000614203 1594 ntBASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
CDK5RAP3Q96JB5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.15□□□□□ -1.9
CDK5RAP3Q96JB5 AC080128.1-201ENST00000474389 1917 ntBASIC3.15□□□□□ -1.9
CDK5RAP3Q96JB5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
CDK5RAP3Q96JB5 Y_RNA.5-201ENST00000362334 102 ntBASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.31-201ENST00000362574 102 ntBASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 RNU6-1285P-201ENST00000363480 105 ntBASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 RNU6-99P-201ENST00000364721 107 ntBASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 RNU6-1286P-201ENST00000383871 107 ntBASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 RN7SKP61-201ENST00000410642 295 ntBASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 RNU2-25P-201ENST00000411041 191 ntBASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 AL139132.1-201ENST00000431587 344 ntBASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 SNORA9.3-201ENST00000516383 129 ntBASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 AC010329.5-201ENST00000623497 2174 ntBASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CDK5RAP3Q96JB5 MTND4P27-201ENST00000450813 1354 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 MIR26A1-201ENST00000362205 77 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 SNORA63-201ENST00000363450 132 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 SNORA9-201ENST00000384215 133 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 SNORA48.2-201ENST00000390926 124 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AC078809.1-201ENST00000427601 140 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AL137792.2-201ENST00000443484 235 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 RPL30P1-201ENST00000488676 339 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 RPL22P13-201ENST00000493291 347 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AC091826.1-201ENST00000514065 313 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 RPPH1-2P-201ENST00000516688 293 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AC115990.1-201ENST00000526957 301 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms