Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 Y_RNA.504-201ENST00000384481 104 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.554-201ENST00000384672 102 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 SNORD73A-201ENST00000386062 65 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 HMGN2P39-201ENST00000398005 273 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 SNAP23P1-201ENST00000433229 246 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 MTCO2P3-201ENST00000442543 421 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 PRELID3BP1-201ENST00000457142 540 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 RNU6-1037P-201ENST00000459571 107 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 RPL23AP42-201ENST00000471152 471 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 SNORA19.2-201ENST00000516013 114 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 SNORD60.2-201ENST00000516883 86 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 RNU2-19P-201ENST00000517288 84 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AC109635.3-201ENST00000529536 185 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AC018630.3-201ENST00000542637 96 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 MIR4287-201ENST00000579398 78 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AC009314.1-201ENST00000603871 304 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AC018889.1-201ENST00000605372 397 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AP000654.2-201ENST00000605633 586 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AC090517.2-201ENST00000614966 680 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AC098679.4-201ENST00000624241 654 ntBASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SNRNP40Q96DI7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.6-201ENST00000362350 114 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.9-201ENST00000362354 101 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 RNU6-451P-201ENST00000362921 107 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 RNY4P14-201ENST00000363656 96 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 MIR29C-201ENST00000385231 88 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 RN7SKP61-201ENST00000410642 295 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 RNU6-1068P-201ENST00000410958 103 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 C8orf59P1-201ENST00000429930 303 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 RPS15AP28-201ENST00000435088 386 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 IFNA20P-201ENST00000436840 528 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 GPM6BP3-201ENST00000442797 145 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 MTND3P16-201ENST00000452205 344 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 HMGN2P23-201ENST00000456759 269 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AC055731.1-201ENST00000474387 401 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AC082651.2-201ENST00000496833 166 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 RNA5SP458-201ENST00000516188 119 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.676-201ENST00000516393 96 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 MTND1P5-201ENST00000517906 940 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AC025423.5-201ENST00000550230 219 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 MIR3923-201ENST00000579521 83 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AP001836.1-201ENST00000604675 523 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AC067747.1-201ENST00000608026 250 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AC092807.2-201ENST00000609367 243 ntBASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.06□□□□□ -2.08
SNRNP40Q96DI7 AL356292.1-201ENST00000283110 373 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 RNU6-1159P-201ENST00000362933 107 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 RNU6-1090P-201ENST00000364065 94 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.231-201ENST00000364358 102 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 RNU6-522P-201ENST00000364497 107 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.402-201ENST00000383972 102 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.450-201ENST00000384198 113 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 SNORA67.3-201ENST00000384366 140 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.505-201ENST00000384489 102 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 MIR221-201ENST00000385135 110 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 RNA5SP181-201ENST00000410246 98 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 USP9YP27-201ENST00000418455 438 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 MTCO1P20-201ENST00000425366 358 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 RNU6-1208P-201ENST00000459588 107 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 RPS27P27-201ENST00000498779 255 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 RNU6-567P-201ENST00000516746 107 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 AC068790.6-201ENST00000602558 258 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 AC080078.2-201ENST00000603766 501 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 AL121757.2-201ENST00000611223 313 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 DISC2.1-201ENST00000612827 205 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 AL132822.1-201ENST00000617063 513 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 MIR219B-201ENST00000637023 88 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 AC080100.1-201ENST00000624239 5356 ntBASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.38-201ENST00000362617 102 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 SNORD32A-201ENST00000364805 84 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 RNU6-214P-201ENST00000384130 107 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 MIR518A2-201ENST00000384966 87 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms