Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AP000553.5-201ENST00000641933 54 ntBASIC2.56□□□□□ -2
SMARCE1Q969G3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMARCE1Q969G3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.56□□□□□ -2
SMARCE1Q969G3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMARCE1Q969G3 CBX3P1-201ENST00000325243 554 ntBASIC2.55□□□□□ -2
SMARCE1Q969G3 RNU6-227P-201ENST00000362865 103 ntBASIC2.55□□□□□ -2
SMARCE1Q969G3 SNORA5B-201ENST00000363786 132 ntBASIC2.55□□□□□ -2
SMARCE1Q969G3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.55□□□□□ -2
SMARCE1Q969G3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.55□□□□□ -2
SMARCE1Q969G3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.55□□□□□ -2
SMARCE1Q969G3 AL645568.3-201ENST00000433683 316 ntBASIC2.55□□□□□ -2
SMARCE1Q969G3 MTND4LP16-201ENST00000440828 295 ntBASIC2.55□□□□□ -2
SMARCE1Q969G3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.55□□□□□ -2
SMARCE1Q969G3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.55□□□□□ -2
SMARCE1Q969G3 RNU6-566P-201ENST00000516790 107 ntBASIC2.55□□□□□ -2
SMARCE1Q969G3 AP005902.1-201ENST00000521358 186 ntBASIC2.55□□□□□ -2
SMARCE1Q969G3 AP005639.2-201ENST00000527592 928 ntBASIC2.55□□□□□ -2
SMARCE1Q969G3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.55□□□□□ -2
SMARCE1Q969G3 MIR4801-201ENST00000582704 82 ntBASIC2.55□□□□□ -2
SMARCE1Q969G3 AL133215.3-201ENST00000609801 448 ntBASIC2.55□□□□□ -2
SMARCE1Q969G3 MIR5739-201ENST00000619803 80 ntBASIC2.55□□□□□ -2
SMARCE1Q969G3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.55□□□□□ -2
SMARCE1Q969G3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.55□□□□□ -2
SMARCE1Q969G3 AC099654.14-201ENST00000638599 341 ntBASIC2.55□□□□□ -2
SMARCE1Q969G3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.55□□□□□ -2
SMARCE1Q969G3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SMARCE1Q969G3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMARCE1Q969G3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMARCE1Q969G3 SNORA36A-201ENST00000384221 132 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 MIR95-201ENST00000385072 81 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 RNU6-510P-201ENST00000391239 108 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMARCE1Q969G3 AL591034.2-201ENST00000402839 359 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 RN7SKP61-201ENST00000410642 295 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 HMGB3P2-201ENST00000411913 584 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 MTND3P8-201ENST00000412909 339 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.54□□□□□ -2
SMARCE1Q969G3 AL133396.1-201ENST00000432048 687 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 AC018634.1-201ENST00000437554 401 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 U8.21-201ENST00000459536 136 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 RN7SL636P-201ENST00000497504 294 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 AC116353.2-201ENST00000505332 712 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 PRDX4P1-201ENST00000507189 574 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 RNA5SP454-201ENST00000517231 127 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 AC109329.2-201ENST00000519658 482 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 AC115990.1-201ENST00000526957 301 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 IMMP1LP2-201ENST00000552954 492 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.54□□□□□ -2
SMARCE1Q969G3 RBM11P1-201ENST00000604951 799 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMARCE1Q969G3 MIR3976-201ENST00000606807 139 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.54□□□□□ -2
SMARCE1Q969G3 AC090517.3-201ENST00000625170 141 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 SNORD98-201ENST00000636377 67 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 AL450472.1-202ENST00000637286 180 ntBASIC2.54□□□□□ -2
SMARCE1Q969G3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.54□□□□□ -2
SMARCE1Q969G3 AC009541.1-201ENST00000438279 2662 ntBASIC2.53□□□□□ -2
SMARCE1Q969G3 RNU6-1013P-201ENST00000384180 107 ntBASIC2.53□□□□□ -2
SMARCE1Q969G3 Y_RNA.504-201ENST00000384481 104 ntBASIC2.53□□□□□ -2
SMARCE1Q969G3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.53□□□□□ -2
SMARCE1Q969G3 NDUFB4P4-201ENST00000404822 243 ntBASIC2.53□□□□□ -2
SMARCE1Q969G3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.53□□□□□ -2
SMARCE1Q969G3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.53□□□□□ -2
SMARCE1Q969G3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.53□□□□□ -2
SMARCE1Q969G3 AL161788.1-201ENST00000441805 169 ntBASIC2.53□□□□□ -2
SMARCE1Q969G3 PPP1R2P5-201ENST00000457256 603 ntBASIC2.53□□□□□ -2
SMARCE1Q969G3 AC104435.1-201ENST00000483483 166 ntBASIC2.53□□□□□ -2
SMARCE1Q969G3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.53□□□□□ -2
SMARCE1Q969G3 HMGB1P35-201ENST00000503360 598 ntBASIC2.53□□□□□ -2
SMARCE1Q969G3 AL117351.2-201ENST00000513571 157 ntBASIC2.53□□□□□ -2
SMARCE1Q969G3 Y_RNA.682-201ENST00000516457 100 ntBASIC2.53□□□□□ -2
SMARCE1Q969G3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.53□□□□□ -2
SMARCE1Q969G3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.53□□□□□ -2
SMARCE1Q969G3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.53□□□□□ -2
SMARCE1Q969G3 AL356157.2-201ENST00000605122 111 ntBASIC2.53□□□□□ -2
SMARCE1Q969G3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SMARCE1Q969G3 RNU1-23P-201ENST00000363361 144 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 RNU6-767P-201ENST00000384132 107 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 MIR521-1-201ENST00000384902 87 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 BTF3L4P2-201ENST00000392798 346 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AC138393.2-201ENST00000414742 246 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AC009963.1-201ENST00000417265 157 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 RPL21P111-201ENST00000418453 477 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AL590135.1-201ENST00000422215 156 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AC019205.3-201ENST00000424573 156 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AC078809.1-201ENST00000427601 140 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.52□□□□□ -2.01
SMARCE1Q969G3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AC016700.2-201ENST00000446011 156 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 MTND1P17-201ENST00000448961 204 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AC011753.1-201ENST00000451001 220 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.52□□□□□ -2.01
SMARCE1Q969G3 PMCHL2-203ENST00000457791 237 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.52□□□□□ -2.01
SMARCE1Q969G3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AC015911.1-201ENST00000495111 156 ntBASIC2.52□□□□□ -2.01
SMARCE1Q969G3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.52□□□□□ -2.01
SMARCE1Q969G3 RNU6-586P-201ENST00000517265 104 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms