Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 AC097460.3-201ENST00000623099 442 ntBASIC0.29□□□□□ -2.36
SKA2Q8WVK7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
SKA2Q8WVK7 RNY1-201ENST00000364228 113 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 Y_RNA.355-201ENST00000365462 98 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 RNU6-354P-201ENST00000383862 107 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 SNORA32.2-201ENST00000384049 122 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 RNU6-610P-201ENST00000384264 107 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 MIR598-201ENST00000384868 97 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 MTCO1P21-201ENST00000416634 589 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 TIMM9P2-201ENST00000419324 266 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 MTCO2P1-201ENST00000424648 477 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.28□□□□□ -2.36
SKA2Q8WVK7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.28□□□□□ -2.36
SKA2Q8WVK7 AC245047.7-201ENST00000440265 293 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 PAXBP1P1-201ENST00000449315 447 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 MTCYBP1-201ENST00000454315 1119 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 MTND2P30-201ENST00000456663 382 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 AC093899.1-201ENST00000457984 376 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 AC023050.2-201ENST00000544968 387 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 AL136520.1-202ENST00000555494 763 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 AL512347.1-201ENST00000566420 503 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 AC018889.1-201ENST00000605372 397 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 MIR15A-201ENST00000607334 83 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 AC124016.2-201ENST00000610058 665 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 SCARNA4-202ENST00000625402 129 ntBASIC0.28□□□□□ -2.36
SKA2Q8WVK7 MIR412-201ENST00000362142 91 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 RNU6-37P-201ENST00000362692 107 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 RNU6-11P-201ENST00000364234 107 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 RNU6-207P-201ENST00000384137 107 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 Y_RNA.508-201ENST00000384502 114 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 RPS3AP36-201ENST00000398190 775 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 AC092809.3-201ENST00000415453 231 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 AC092423.1-201ENST00000430165 186 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 RPS20P10-201ENST00000451209 253 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.27□□□□□ -2.37
SKA2Q8WVK7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.27□□□□□ -2.37
SKA2Q8WVK7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.27□□□□□ -2.37
SKA2Q8WVK7 RNU6-1041P-201ENST00000516254 102 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 RNU6-677P-201ENST00000516914 101 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 MIR3912-201ENST00000577566 105 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 MIR3136-201ENST00000583498 78 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SKA2Q8WVK7 MIR6516-201ENST00000630554 81 ntBASIC0.27□□□□□ -2.37
SKA2Q8WVK7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
SKA2Q8WVK7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.27□□□□□ -2.37
SKA2Q8WVK7 SMIM11P1-201ENST00000369586 178 ntBASIC0.26□□□□□ -2.37
SKA2Q8WVK7 RNU6-1105P-201ENST00000384774 107 ntBASIC0.26□□□□□ -2.37
SKA2Q8WVK7 AL031577.2-201ENST00000404133 280 ntBASIC0.26□□□□□ -2.37
SKA2Q8WVK7 MTCO1P17-201ENST00000411522 491 ntBASIC0.26□□□□□ -2.37
SKA2Q8WVK7 AL953862.1-201ENST00000423016 168 ntBASIC0.26□□□□□ -2.37
SKA2Q8WVK7 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
SKA2Q8WVK7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.26□□□□□ -2.37
SKA2Q8WVK7 AP003355.1-201ENST00000518956 587 ntBASIC0.26□□□□□ -2.37
SKA2Q8WVK7 AP001893.2-201ENST00000526949 202 ntBASIC0.26□□□□□ -2.37
SKA2Q8WVK7 AL031281.1-201ENST00000604049 488 ntBASIC0.26□□□□□ -2.37
SKA2Q8WVK7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.26□□□□□ -2.37
SKA2Q8WVK7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.26□□□□□ -2.37
SKA2Q8WVK7 AC024940.5-201ENST00000622889 474 ntBASIC0.26□□□□□ -2.37
SKA2Q8WVK7 SNORA80D-201ENST00000384488 135 ntBASIC0.25□□□□□ -2.37
SKA2Q8WVK7 MIR216A-201ENST00000385063 110 ntBASIC0.25□□□□□ -2.37
SKA2Q8WVK7 RPL23AP95-201ENST00000426806 265 ntBASIC0.25□□□□□ -2.37
SKA2Q8WVK7 AC006026.2-201ENST00000457376 180 ntBASIC0.25□□□□□ -2.37
SKA2Q8WVK7 AC119751.4-201ENST00000507498 357 ntBASIC0.25□□□□□ -2.37
SKA2Q8WVK7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.25□□□□□ -2.37
SKA2Q8WVK7 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
SKA2Q8WVK7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.25□□□□□ -2.37
SKA2Q8WVK7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.25□□□□□ -2.37
SKA2Q8WVK7 APOOP3-201ENST00000536787 586 ntBASIC0.25□□□□□ -2.37
SKA2Q8WVK7 AC092451.2-201ENST00000538746 658 ntBASIC0.25□□□□□ -2.37
SKA2Q8WVK7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.25□□□□□ -2.37
SKA2Q8WVK7 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.25□□□□□ -2.37
SKA2Q8WVK7 Y_RNA.118-201ENST00000363300 101 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 SNORD114-23-201ENST00000363536 72 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 RNU5A-8P-201ENST00000364102 114 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 NDUFB1P2-201ENST00000449477 176 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.24□□□□□ -2.37
SKA2Q8WVK7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.24□□□□□ -2.37
SKA2Q8WVK7 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.24□□□□□ -2.37
SKA2Q8WVK7 AC092991.1-201ENST00000477176 376 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 RPS26P48-201ENST00000491713 339 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.24□□□□□ -2.37
SKA2Q8WVK7 AL353778.1-201ENST00000603149 408 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 Z83818.1-201ENST00000603584 150 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 AL138889.2-201ENST00000603883 242 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 AL034555.1-201ENST00000604816 211 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 AC008147.4-201ENST00000617570 1204 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 SNORD3E-202ENST00000627253 216 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 AC004808.1-201ENST00000627671 721 ntBASIC0.24□□□□□ -2.37
SKA2Q8WVK7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.23□□□□□ -2.37
SKA2Q8WVK7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.23□□□□□ -2.37
SKA2Q8WVK7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.23□□□□□ -2.37
SKA2Q8WVK7 AC091435.1-201ENST00000505442 584 ntBASIC0.23□□□□□ -2.37
SKA2Q8WVK7 AC105758.1-201ENST00000506038 399 ntBASIC0.23□□□□□ -2.37
SKA2Q8WVK7 RNU6-922P-201ENST00000516753 99 ntBASIC0.23□□□□□ -2.37
SKA2Q8WVK7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.23□□□□□ -2.37
SKA2Q8WVK7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.23□□□□□ -2.37
SKA2Q8WVK7 MIR5695-201ENST00000579717 85 ntBASIC0.23□□□□□ -2.37
SKA2Q8WVK7 MIR4742-201ENST00000581069 85 ntBASIC0.23□□□□□ -2.37
SKA2Q8WVK7 HMGN1P30-201ENST00000589286 268 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms