Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 SNORD59.2-201ENST00000516873 68 ntBASIC3.58□□□□□ -1.84
SMC1BQ8NDV3 CKS1BP7-201ENST00000522230 235 ntBASIC3.58□□□□□ -1.84
SMC1BQ8NDV3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.58□□□□□ -1.84
SMC1BQ8NDV3 AC092447.9-201ENST00000603395 144 ntBASIC3.58□□□□□ -1.84
SMC1BQ8NDV3 AC091152.3-201ENST00000604227 325 ntBASIC3.58□□□□□ -1.84
SMC1BQ8NDV3 AC007485.1-201ENST00000616755 206 ntBASIC3.58□□□□□ -1.84
SMC1BQ8NDV3 AC091925.1-201ENST00000623204 462 ntBASIC3.58□□□□□ -1.84
SMC1BQ8NDV3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.58□□□□□ -1.84
SMC1BQ8NDV3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SMC1BQ8NDV3 AC010889.1-201ENST00000566193 2666 ntBASIC3.58□□□□□ -1.84
SMC1BQ8NDV3 AC096644.4-201ENST00000563417 2912 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 Y_RNA.145-201ENST00000363527 102 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 SNORA63C-201ENST00000364578 129 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 SNORA14A-201ENST00000364773 135 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 Y_RNA.496-201ENST00000384444 101 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 MIR544A-201ENST00000384855 91 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 MIR147B-201ENST00000390185 80 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 MIR767-201ENST00000390228 109 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 MRPL42P3-201ENST00000401492 326 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 RNU6-1156P-201ENST00000410365 100 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 AL591806.2-201ENST00000433122 173 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 RN7SKP210-201ENST00000459176 261 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 RPS29P21-201ENST00000496272 170 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 AL590705.4-201ENST00000532209 134 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 GNAI2P1-201ENST00000541815 315 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 AC004584.2-201ENST00000570407 410 ntBASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.57□□□□□ -1.84
SMC1BQ8NDV3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 RBBP8P1-201ENST00000449447 1844 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 AC233981.2-201ENST00000611524 1614 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 RNA5SP383-201ENST00000362934 120 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 Y_RNA.158-201ENST00000363651 101 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 RNU6-142P-201ENST00000384019 107 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 SNORA67.4-201ENST00000384688 142 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 MIR764-201ENST00000390811 85 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 MTCYBP2-201ENST00000407745 171 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 MRPS18CP6-201ENST00000423587 223 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 RPL30P10-201ENST00000488148 337 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 AC015911.1-201ENST00000495111 156 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 AC105758.1-201ENST00000506038 399 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 IGKV3-31-201ENST00000523109 329 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 AC004832.5-201ENST00000608677 401 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 AL138825.1-201ENST00000618587 192 ntBASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SMC1BQ8NDV3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 MTND4P1-201ENST00000457501 1466 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 ZNF72P-201ENST00000425869 1908 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 RNU6-859P-201ENST00000362728 107 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 RNU6-968P-201ENST00000384076 107 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 RNU6-1222P-201ENST00000384615 107 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 RNU2-23P-201ENST00000410545 195 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 AC092423.1-201ENST00000430165 186 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 AL160004.2-201ENST00000432935 350 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 AL031659.1-201ENST00000447075 539 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 SNRPGP7-201ENST00000469016 106 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 AC144568.1-201ENST00000520139 137 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 AC068657.1-201ENST00000520807 306 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 MIR5701-3-201ENST00000578890 82 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 AC090897.2-201ENST00000581715 130 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 MIR5701-1-201ENST00000585138 82 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 AL355877.2-201ENST00000603670 358 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 AL162730.1-201ENST00000605734 292 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 RNU6-91P-201ENST00000607774 107 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 MIR5701-2-201ENST00000615634 82 ntBASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.55□□□□□ -1.84
SMC1BQ8NDV3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 AC008669.1-201ENST00000565823 2178 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 Y_RNA.80-201ENST00000362996 102 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 RNU6-1141P-201ENST00000364520 107 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 RNA5SP354-201ENST00000391247 136 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 AL365496.1-201ENST00000426885 215 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 CST9LP2-201ENST00000437612 320 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 AP001025.1-201ENST00000486139 332 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 AC104564.1-201ENST00000493028 407 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 GZMAP1-201ENST00000503054 631 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms