Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 MIR3122-201ENST00000577243 73 ntBASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 AC008749.1-201ENST00000597650 306 ntBASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 MIR92B-201ENST00000607575 96 ntBASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.97□□□□□ -2.09
CCDC197Q8NCU1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 SNORD113-7-201ENST00000363762 77 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 SNORD32B-201ENST00000364460 84 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 RNU6-1317P-201ENST00000364582 104 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 RNU6-611P-201ENST00000384276 104 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 Y_RNA.530-201ENST00000384587 101 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 MTCYBP2-201ENST00000407745 171 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 RNA5SP201-201ENST00000410316 124 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AL590556.1-201ENST00000423231 483 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 UBE2V1P8-201ENST00000437166 265 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AMD1P1-201ENST00000457220 922 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AC055731.1-201ENST00000474387 401 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AC145146.1-201ENST00000496370 254 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 FAM206BP-201ENST00000510179 541 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AC011352.1-201ENST00000512300 793 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AC108043.1-201ENST00000512696 574 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AC025465.4-201ENST00000513422 638 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 RNU6-965P-201ENST00000516721 96 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AL031274.2-201ENST00000599419 203 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AC078795.3-201ENST00000602913 472 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AC004777.1-201ENST00000624317 287 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 AC073869.6-201ENST00000640656 341 ntBASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCDC197Q8NCU1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 SNORA71.3-201ENST00000362582 128 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 RNU6-227P-201ENST00000362865 103 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 RNU6-128P-201ENST00000383976 107 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 Y_RNA.504-201ENST00000384481 104 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 SNORA12-201ENST00000391162 147 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 SNORD115-47-201ENST00000391226 86 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 RNU6-325P-201ENST00000411132 105 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 RNU6-373P-201ENST00000411247 98 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 MTCO3P18-201ENST00000440206 761 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 RPL9P9-202ENST00000466501 579 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 TRBVA-201ENST00000498804 316 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 MTCYBP18-201ENST00000501056 747 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 RNA5SP281-201ENST00000516504 135 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 AC107953.1-201ENST00000522216 297 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 AC021231.3-201ENST00000558497 370 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 MIR5195-201ENST00000583555 115 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 AC068790.6-201ENST00000602558 258 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 SNRPGP17-201ENST00000603780 214 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 AC090617.10-201ENST00000624308 134 ntBASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CCDC197Q8NCU1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 Y_RNA.100-201ENST00000363141 102 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 Y_RNA.295-201ENST00000364918 102 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 XGY1-201ENST00000381172 446 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 RNU6-877P-201ENST00000383868 107 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 SNORA36A-201ENST00000384221 132 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 BTF3L4P2-201ENST00000392798 346 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 HMGN2P39-201ENST00000398005 273 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 VN1R36P-201ENST00000414936 291 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 MTND3P9-201ENST00000429526 346 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 USP9YP28-201ENST00000435142 589 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 U8.21-201ENST00000459536 136 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 RNU2-44P-201ENST00000516795 194 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 AC007375.1-201ENST00000554513 578 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 CPDP1-201ENST00000579660 283 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 Z98751.3-201ENST00000604447 521 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 AC098679.4-201ENST00000624241 654 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 MIR1248-201ENST00000629190 106 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 AC009541.1-201ENST00000438279 2662 ntBASIC1.94□□□□□ -2.1
CCDC197Q8NCU1 RNU6-1252P-201ENST00000363054 104 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 SNORD46.1-201ENST00000364139 104 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 RNU4-56P-201ENST00000364700 142 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 Y_RNA.453-201ENST00000384223 109 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms