Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AC006023.1-201ENST00000603944 259 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 SNORD98-201ENST00000636377 67 ntBASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.38□□□□□ -1.87
PRPF38AQ8NAV1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 ZNF299P-201ENST00000406845 1804 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 SNORD50.1-201ENST00000362987 71 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 Y_RNA.509-201ENST00000384506 99 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 AL590556.1-201ENST00000423231 483 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 RPL23AP50-201ENST00000434149 455 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 UQCRHP3-201ENST00000451503 251 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 RPL7P42-201ENST00000481005 679 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 HMGB1P35-201ENST00000503360 598 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 AC097473.1-201ENST00000508142 408 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 RPL23AP94-201ENST00000512518 302 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 RN7SKP132-201ENST00000516001 208 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 RNU5F-2P-201ENST00000516066 82 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 MIR5696-201ENST00000578474 85 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 AL034555.1-201ENST00000604816 211 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 MTND4LP32-201ENST00000636111 270 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 AC009487.2-201ENST00000420969 6821 ntBASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRPF38AQ8NAV1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 Y_RNA.58-201ENST00000362807 102 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 Y_RNA.154-201ENST00000363624 102 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 RNY3P1-201ENST00000365085 102 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 RNY3-201ENST00000365484 102 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 SNORA18.3-201ENST00000384122 132 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 Y_RNA.460-201ENST00000384255 102 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 SNORA41-201ENST00000384675 132 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 MIR887-201ENST00000401258 79 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 AC104389.3-201ENST00000445629 235 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 AL353705.4-201ENST00000449661 238 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 EEF1B2P7-201ENST00000451177 676 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 AC079354.2-201ENST00000453523 154 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 RPL30P15-201ENST00000457129 321 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 AC090525.1-201ENST00000479116 478 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 RN7SL499P-201ENST00000481141 276 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 AC005741.1-201ENST00000511094 432 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 RNA5SP76-201ENST00000516277 87 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 AC093249.1-201ENST00000567049 203 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 MIR4672-201ENST00000583126 81 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 AC084781.2-201ENST00000615568 161 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 HMGB1P24-202ENST00000615653 685 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 SNORA43.4-201ENST00000629559 138 ntBASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRPF38AQ8NAV1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 RNU4-9P-201ENST00000364951 139 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 RNU6-310P-201ENST00000384655 107 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 MIR29B2-201ENST00000385055 81 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 AC011816.1-201ENST00000441346 546 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 ELOCP24-201ENST00000456370 334 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 RPS3P1-201ENST00000456781 192 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 CYP2C59P-201ENST00000457790 269 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 RN7SKP210-201ENST00000459176 261 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 FO393415.2-201ENST00000480085 343 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 AC093303.1-201ENST00000514549 295 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 RNU6-264P-201ENST00000517134 104 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 MIR3923-201ENST00000579521 83 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 AL713866.2-201ENST00000603579 219 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 MIR5739-201ENST00000619803 80 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 AC090574.1-201ENST00000623186 233 ntBASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PRPF38AQ8NAV1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 Y_RNA.404-201ENST00000383978 102 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 Y_RNA.473-201ENST00000384333 102 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 SNORD116-29-201ENST00000384516 83 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 SNORA26.7-201ENST00000391288 122 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 SNORA75.6-201ENST00000391318 127 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 RPL21P75-201ENST00000396599 483 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 RPL21P28-201ENST00000401418 483 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 Y_RNA.646-201ENST00000410980 101 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 RNU2-25P-201ENST00000411041 191 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 RPS20P15-201ENST00000412792 311 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 AC087499.2-201ENST00000432861 149 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 RPL21P39-201ENST00000463605 483 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 AC090515.1-201ENST00000465295 476 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 AC087190.1-201ENST00000484462 480 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 RN7SL633P-201ENST00000488974 297 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 AC093591.1-201ENST00000491435 481 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms