Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 VN1R36P-201ENST00000414936 291 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AL133396.1-201ENST00000432048 687 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC63Q8NA47 USP9YP28-201ENST00000435142 589 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AC007547.1-201ENST00000462177 490 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 CKS1BP2-201ENST00000497342 240 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC63Q8NA47 SNORA31.16-201ENST00000516773 139 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 MIR514B-201ENST00000516774 80 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 RNU6-612P-201ENST00000516909 102 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 RN7SKP256-201ENST00000517201 314 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AC115990.1-201ENST00000526957 301 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AC118273.2-201ENST00000532092 465 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 CYCSP26-201ENST00000534107 320 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC63Q8NA47 MIR3672-201ENST00000584290 82 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AL356157.2-201ENST00000605122 111 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AC018889.1-201ENST00000605372 397 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AC092794.1-201ENST00000612734 582 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AL161423.1-201ENST00000613700 262 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AL138726.1-201ENST00000614873 333 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AC008121.3-201ENST00000618726 433 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC63Q8NA47 AP000560.1-201ENST00000624150 1937 ntBASIC2.16□□□□□ -2.06
CCDC63Q8NA47 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC63Q8NA47 KPNA2P1-201ENST00000458289 1591 ntBASIC2.15□□□□□ -2.06
CCDC63Q8NA47 RNU4-15P-201ENST00000362613 141 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 Y_RNA.135-201ENST00000363439 95 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 RNU6-1317P-201ENST00000364582 104 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC63Q8NA47 RNU6-214P-201ENST00000384130 107 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC63Q8NA47 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC63Q8NA47 AC096664.2-201ENST00000411843 406 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 UBE2V1P4-201ENST00000425374 344 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC63Q8NA47 AC244670.1-201ENST00000436879 112 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 RPL32P28-201ENST00000443577 397 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC63Q8NA47 AC025465.4-201ENST00000513422 638 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC63Q8NA47 RNA5SP281-201ENST00000516504 135 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC63Q8NA47 HSPE1P4-201ENST00000550617 308 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 CPDP1-201ENST00000579660 283 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 MIR3942-201ENST00000585264 109 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 AL078605.1-201ENST00000603529 500 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 AL034555.1-201ENST00000604816 211 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 AL160281.1-201ENST00000605307 311 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC63Q8NA47 AC006504.8-201ENST00000621046 635 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 SNORD98-201ENST00000636377 67 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 AC100810.6-201ENST00000638068 285 ntBASIC2.15□□□□□ -2.07
CCDC63Q8NA47 CENPCP1-201ENST00000533085 2578 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC63Q8NA47 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC63Q8NA47 SNORA5B-201ENST00000363786 132 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 SNORA25B-201ENST00000365507 128 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC63Q8NA47 RNU6-128P-201ENST00000383976 107 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 RNU6-325P-201ENST00000411132 105 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 AL030996.1-201ENST00000411430 235 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 ZNF885P-201ENST00000420174 1098 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 AL590632.1-201ENST00000424289 371 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 AC078809.1-201ENST00000427601 140 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 AC006946.1-201ENST00000429106 328 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC63Q8NA47 NFU1P2-201ENST00000448700 469 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC63Q8NA47 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC63Q8NA47 RPL9P9-202ENST00000466501 579 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 TRBVA-201ENST00000498804 316 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 AC022447.4-201ENST00000504053 364 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 RNU6-256P-201ENST00000516747 97 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC63Q8NA47 AC026371.1-201ENST00000551867 419 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 AC078795.3-201ENST00000602913 472 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC63Q8NA47 AL136221.1-201ENST00000621449 509 ntBASIC2.14□□□□□ -2.07
CCDC63Q8NA47 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC63Q8NA47 MTND4P5-201ENST00000435821 1374 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC63Q8NA47 RNA5SP387-201ENST00000364226 106 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 RNU1-91P-201ENST00000364746 163 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 Y_RNA.333-201ENST00000365274 102 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 SNORA36A-201ENST00000384221 132 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 RNU6-831P-201ENST00000384548 107 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 MIR29B2-201ENST00000385055 81 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 RNU6-1106P-201ENST00000390845 107 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 AL590135.1-201ENST00000422215 156 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 AC019205.3-201ENST00000424573 156 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 AC016700.2-201ENST00000446011 156 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 MTND1P11-201ENST00000456661 876 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 RNU7-187P-201ENST00000458985 68 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms