Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RTL3Q8N8U3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
RTL3Q8N8U3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
RTL3Q8N8U3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RTL3Q8N8U3 RNU6-254P-201ENST00000363377 107 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 SNORA72.1-201ENST00000363485 129 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 RNU6-1210P-201ENST00000363775 107 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 RNU5E-7P-201ENST00000365290 117 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 Y_RNA.414-201ENST00000384011 101 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 RN7SKP223-201ENST00000410582 62 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 AC009161.1-201ENST00000417306 376 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 AC055731.1-201ENST00000474387 401 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 AC046134.1-201ENST00000514454 666 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 RNU2-19P-201ENST00000517288 84 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 AC107953.1-201ENST00000522216 297 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.21□□□□□ -2.06
RTL3Q8N8U3 AL121579.1-201ENST00000555129 305 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.21□□□□□ -2.06
RTL3Q8N8U3 MIR5692C1-201ENST00000585309 91 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RTL3Q8N8U3 AC009033.1-201ENST00000624279 431 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 AC100810.6-201ENST00000638068 285 ntBASIC2.21□□□□□ -2.06
RTL3Q8N8U3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RTL3Q8N8U3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RTL3Q8N8U3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.2□□□□□ -2.06
RTL3Q8N8U3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RTL3Q8N8U3 AL596028.1-201ENST00000326971 197 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 SNORD113-7-201ENST00000363762 77 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 Y_RNA.212-201ENST00000364177 102 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 SNORA16B-201ENST00000364674 135 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 RNA5SP126-201ENST00000365092 109 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 SNORA11.4-201ENST00000408823 129 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.2□□□□□ -2.06
RTL3Q8N8U3 AL353572.1-201ENST00000442490 417 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 MTCO2P3-201ENST00000442543 421 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.2□□□□□ -2.06
RTL3Q8N8U3 PMCHL2-203ENST00000457791 237 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 AL121594.1-201ENST00000475906 575 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 TRBVA-201ENST00000498804 316 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 HMGN1P12-201ENST00000499125 195 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 SNORA19.2-201ENST00000516013 114 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 RNU6-864P-201ENST00000516256 108 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.2□□□□□ -2.06
RTL3Q8N8U3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.2□□□□□ -2.06
RTL3Q8N8U3 APOOP1-201ENST00000604695 592 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 AC022202.1-201ENST00000613515 211 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 AC009248.2-201ENST00000619826 254 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 RMST_7.1-201ENST00000621935 268 ntBASIC2.2□□□□□ -2.06
RTL3Q8N8U3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.2□□□□□ -2.06
RTL3Q8N8U3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.2□□□□□ -2.06
RTL3Q8N8U3 AC002543.1-201ENST00000299783 1954 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.19□□□□□ -2.06
RTL3Q8N8U3 RNU6-845P-201ENST00000362578 103 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 Y_RNA.135-201ENST00000363439 95 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 Y_RNA.373-201ENST00000365600 103 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 RNU6-831P-201ENST00000384548 107 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AL591043.1-201ENST00000432461 424 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 IFNA20P-201ENST00000436840 528 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AC098614.3-201ENST00000438957 440 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AC096638.1-201ENST00000444678 216 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AL353705.4-201ENST00000449661 238 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 RNU6-329P-201ENST00000459618 107 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AC018868.1-201ENST00000491307 315 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.19□□□□□ -2.06
RTL3Q8N8U3 RN7SKP256-201ENST00000517201 314 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.19□□□□□ -2.06
RTL3Q8N8U3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.19□□□□□ -2.06
RTL3Q8N8U3 COPS8P3-201ENST00000526024 482 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AP000763.2-201ENST00000540641 163 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AC011712.1-201ENST00000588959 234 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AC123912.5-201ENST00000605470 343 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AL121757.2-201ENST00000611223 313 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 MIR6840-201ENST00000611937 71 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 AL355073.2-201ENST00000612106 557 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
RTL3Q8N8U3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.18□□□□□ -2.06
RTL3Q8N8U3 RNU6-78P-201ENST00000362897 107 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 RNU6-527P-201ENST00000363425 104 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 Y_RNA.301-201ENST00000364990 103 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 RNU6-767P-201ENST00000384132 107 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 SNORA40.19-201ENST00000390846 128 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 RNU6-510P-201ENST00000391239 108 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 HMGN2P39-201ENST00000398005 273 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 CBX3P9-201ENST00000402326 552 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 RN7SKP32-201ENST00000410167 303 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 Y_RNA.604-201ENST00000410574 102 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 RN7SKP192-201ENST00000411291 327 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 PDCL2P1-201ENST00000419302 352 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.18□□□□□ -2.06
RTL3Q8N8U3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RTL3Q8N8U3 GPM6BP3-201ENST00000442797 145 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 MTND5P20-201ENST00000448677 143 ntBASIC2.18□□□□□ -2.06
RTL3Q8N8U3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms