Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 FRG2DP-202ENST00000566967 323 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 MIR4273-201ENST00000582824 84 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 MIR4795-201ENST00000584182 89 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 MIR4298-201ENST00000584380 73 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC011494.1-201ENST00000596454 237 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AP000654.2-201ENST00000605633 586 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 AC026241.1-201ENST00000517873 2142 ntBASIC2.47□□□□□ -2.01
BEST3Q8N1M1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.47□□□□□ -2.01
BEST3Q8N1M1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
BEST3Q8N1M1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
BEST3Q8N1M1 KPNA2P1-201ENST00000458289 1591 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 RNU4-82P-201ENST00000362443 140 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.61-201ENST00000362835 102 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 RNU6-655P-201ENST00000362858 107 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.67-201ENST00000362870 100 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 U3.13-201ENST00000364804 214 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 SNORA75.4-201ENST00000391278 119 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 RNU6-174P-201ENST00000410406 106 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.46□□□□□ -2.02
BEST3Q8N1M1 MTND3P23-201ENST00000431980 347 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 AC236972.2-201ENST00000434979 310 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.46□□□□□ -2.02
BEST3Q8N1M1 AP000705.1-201ENST00000454567 350 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 RPL30P1-201ENST00000488676 339 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 AC022447.4-201ENST00000504053 364 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.46□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.670-201ENST00000516255 105 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 APOOP3-201ENST00000536787 586 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 AC016256.1-201ENST00000547971 354 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 MIR3199-1-201ENST00000582434 88 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 MIR3670-2-201ENST00000582974 65 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 MIR3616-201ENST00000584070 92 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 MIR3670-1-201ENST00000584160 65 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 MIR3670-3-201ENST00000584855 65 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 AC009229.3-201ENST00000608056 282 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 MIR3670-4-201ENST00000612260 65 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.46□□□□□ -2.02
BEST3Q8N1M1 AC080128.1-201ENST00000474389 1917 ntBASIC2.46□□□□□ -2.02
BEST3Q8N1M1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.46□□□□□ -2.02
BEST3Q8N1M1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.46□□□□□ -2.02
BEST3Q8N1M1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
BEST3Q8N1M1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 RNU4-79P-201ENST00000362764 141 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 RNU6-1059P-201ENST00000363752 98 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 RNU6-1210P-201ENST00000363775 107 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 RNU6-1188P-201ENST00000363795 107 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.45□□□□□ -2.02
BEST3Q8N1M1 RNU6-842P-201ENST00000384269 107 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.504-201ENST00000384481 104 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 MIR592-201ENST00000384959 97 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 MIR218-1-201ENST00000384999 110 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
BEST3Q8N1M1 MTCYBP4-201ENST00000401524 249 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 MTCO2P27-201ENST00000420740 428 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 AIMP1P2-201ENST00000425294 312 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 RPL30P4-201ENST00000429309 333 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 Z96811.1-201ENST00000445880 108 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.632-201ENST00000459189 102 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.45□□□□□ -2.02
BEST3Q8N1M1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.45□□□□□ -2.02
BEST3Q8N1M1 AIG1P1-201ENST00000503376 148 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 AC091874.1-201ENST00000511402 339 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 AC008549.1-201ENST00000512900 643 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 RNU2-53P-201ENST00000516257 147 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.45□□□□□ -2.02
BEST3Q8N1M1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.45□□□□□ -2.02
BEST3Q8N1M1 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.45□□□□□ -2.02
BEST3Q8N1M1 MIR3136-201ENST00000583498 78 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 MIR6817-201ENST00000615588 66 ntBASIC2.45□□□□□ -2.02
BEST3Q8N1M1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
BEST3Q8N1M1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.45□□□□□ -2.02
BEST3Q8N1M1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
BEST3Q8N1M1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
BEST3Q8N1M1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
BEST3Q8N1M1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.44□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.2-201ENST00000362330 96 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 SNORD50.1-201ENST00000362987 71 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 RNU6-461P-201ENST00000364195 107 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 Y_RNA.509-201ENST00000384506 99 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 MIR627-201ENST00000384979 97 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 CBX3P9-201ENST00000402326 552 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 RPL19P1-201ENST00000411635 428 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.44□□□□□ -2.02
BEST3Q8N1M1 GPM6BP3-201ENST00000442797 145 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AC080013.2-201ENST00000460866 323 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AL121594.1-201ENST00000475906 575 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 AC103975.1-201ENST00000482506 483 ntBASIC2.44□□□□□ -2.02
BEST3Q8N1M1 RPL23AP70-201ENST00000483361 460 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms