Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 C8orf59P2-201ENST00000603441 271 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 AL159153.1-201ENST00000619688 317 ntBASIC2.81□□□□□ -1.96
HERC6Q8IVU3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HERC6Q8IVU3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HERC6Q8IVU3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.8□□□□□ -1.96
HERC6Q8IVU3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AC092268.1-201ENST00000342691 405 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 SNORD114-30-201ENST00000364448 72 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HERC6Q8IVU3 RNU6-43P-201ENST00000384302 107 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 MIR518C-201ENST00000384822 101 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 RPL21P75-201ENST00000396599 483 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 RPL21P28-201ENST00000401418 483 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 RN7SKP223-201ENST00000410582 62 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 RNU2-41P-201ENST00000410991 178 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 RNU6-325P-201ENST00000411132 105 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 NCOR1P3-201ENST00000420479 303 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AC244670.1-201ENST00000436879 112 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AC104389.3-201ENST00000445629 235 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.8□□□□□ -1.96
HERC6Q8IVU3 RPL21P39-201ENST00000463605 483 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AL121594.1-201ENST00000475906 575 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 RPS27AP9-201ENST00000477681 438 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AC087190.1-201ENST00000484462 480 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AC093591.1-201ENST00000491435 481 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 RPL21P16-201ENST00000495531 483 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AIG1P1-201ENST00000503376 148 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 RN7SKP24-201ENST00000515888 284 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 RNU7-30P-201ENST00000516835 62 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.8□□□□□ -1.96
HERC6Q8IVU3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.8□□□□□ -1.96
HERC6Q8IVU3 MIR4742-201ENST00000581069 85 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 FGF7P1-201ENST00000582820 288 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AL117336.2-201ENST00000602435 335 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AC019193.3-201ENST00000609144 554 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AC063943.3-201ENST00000615562 356 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.8□□□□□ -1.96
HERC6Q8IVU3 AC009541.1-201ENST00000438279 2662 ntBASIC2.8□□□□□ -1.96
HERC6Q8IVU3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
HERC6Q8IVU3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HERC6Q8IVU3 Y_RNA.142-201ENST00000363491 102 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 Y_RNA.301-201ENST00000364990 103 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 RNU6-95P-201ENST00000384697 107 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 MIR521-1-201ENST00000384902 87 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 RNU6-1009P-201ENST00000390996 107 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
HERC6Q8IVU3 AL356432.1-201ENST00000405809 419 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 RN7SKP61-201ENST00000410642 295 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.79□□□□□ -1.96
HERC6Q8IVU3 IFNA11P-201ENST00000446352 526 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.79□□□□□ -1.96
HERC6Q8IVU3 MTND1P11-201ENST00000456661 876 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 RN7SL297P-201ENST00000483161 293 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.79□□□□□ -1.96
HERC6Q8IVU3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.79□□□□□ -1.96
HERC6Q8IVU3 RNU1-54P-201ENST00000517181 120 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.79□□□□□ -1.96
HERC6Q8IVU3 AP005639.2-201ENST00000527592 928 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 HSPE1P20-201ENST00000538133 289 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 AC015712.3-201ENST00000559380 164 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.79□□□□□ -1.96
HERC6Q8IVU3 AC023824.2-201ENST00000566185 400 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 DEFB122-202ENST00000569013 197 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 MIR4790-201ENST00000577799 79 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.79□□□□□ -1.96
HERC6Q8IVU3 RPL23AP88-201ENST00000605759 454 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 MIR8076-201ENST00000611401 83 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 uc_338.5-201ENST00000611839 155 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 AL133216.2-202ENST00000634512 349 ntBASIC2.79□□□□□ -1.96
HERC6Q8IVU3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
HERC6Q8IVU3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HERC6Q8IVU3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.78□□□□□ -1.96
HERC6Q8IVU3 RNU6-1285P-201ENST00000363480 105 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 Y_RNA.166-201ENST00000363730 102 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 SNORA38-201ENST00000363946 132 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HERC6Q8IVU3 MIR1289-2-201ENST00000408360 111 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.78□□□□□ -1.96
HERC6Q8IVU3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.78□□□□□ -1.96
HERC6Q8IVU3 AC008267.5-201ENST00000424928 265 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.78□□□□□ -1.96
HERC6Q8IVU3 AL133396.1-201ENST00000432048 687 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 AL353705.4-201ENST00000449661 238 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.78□□□□□ -1.96
HERC6Q8IVU3 AC104564.1-201ENST00000493028 407 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 ACA59.1-201ENST00000515966 143 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.78□□□□□ -1.96
HERC6Q8IVU3 ELOCP31-201ENST00000540463 467 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.78□□□□□ -1.96
HERC6Q8IVU3 CPDP1-201ENST00000579660 283 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 MIR4635-201ENST00000583759 79 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 POLR3GP2-201ENST00000588366 668 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.78□□□□□ -1.96
HERC6Q8IVU3 AC124303.1-201ENST00000605703 360 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms