Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC005002.2-201ENST00000438228 269 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 Z82210.1-201ENST00000440037 231 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 AC009237.8-201ENST00000445492 379 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 AC115115.1-201ENST00000449927 248 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 RPS4XP22-201ENST00000480755 780 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 AC078817.1-201ENST00000492623 435 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 RNU1-143P-201ENST00000516296 146 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 AK6P2-201ENST00000549020 471 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 ZNF192P1-203ENST00000565888 810 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 AC012468.1-201ENST00000604888 430 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 SNORD113-5-201ENST00000607261 78 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 U1.23-201ENST00000610293 146 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 RNU1-68P-201ENST00000615382 146 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 U1.39-201ENST00000621562 146 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 SNORA50A-202ENST00000629536 136 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 AC091152.2-201ENST00000591628 2569 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.15□□□□□ -1.91
VRK3Q8IV63 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VRK3Q8IV63 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.15□□□□□ -1.91
VRK3Q8IV63 AF127577.6-201ENST00000623352 2191 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 AC008568.2-201ENST00000623862 2313 ntBASIC3.15□□□□□ -1.91
VRK3Q8IV63 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VRK3Q8IV63 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.14□□□□□ -1.91
VRK3Q8IV63 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.14□□□□□ -1.91
VRK3Q8IV63 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
VRK3Q8IV63 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.14□□□□□ -1.91
VRK3Q8IV63 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
VRK3Q8IV63 AC009541.1-201ENST00000438279 2662 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VRK3Q8IV63 RNU6-1159P-201ENST00000362933 107 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 Y_RNA.122-201ENST00000363331 96 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 RNU6-740P-201ENST00000364734 105 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 RNU6-968P-201ENST00000384076 107 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 MIR34B-201ENST00000385076 84 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 MIR153-2-201ENST00000385225 87 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 RNA5SP44-201ENST00000410446 133 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.14□□□□□ -1.91
VRK3Q8IV63 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.14□□□□□ -1.91
VRK3Q8IV63 AC098831.1-201ENST00000440661 216 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 AC243964.1-201ENST00000441814 261 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 AC124916.1-201ENST00000444020 547 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 HMGN2P21-201ENST00000447764 270 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 snoU13.4-201ENST00000458916 104 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 RN7SL442P-201ENST00000473804 320 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 RPL26P26-201ENST00000480251 434 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 MRPL42P6-201ENST00000486397 371 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 AF186996.7-201ENST00000492781 209 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.14□□□□□ -1.91
VRK3Q8IV63 RNU6-1114P-201ENST00000516022 107 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 RNU2-31P-201ENST00000516954 155 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 AC024405.2-202ENST00000532731 184 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.14□□□□□ -1.91
VRK3Q8IV63 U2.21-201ENST00000637295 81 ntBASIC3.14□□□□□ -1.91
VRK3Q8IV63 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VRK3Q8IV63 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VRK3Q8IV63 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.14□□□□□ -1.91
VRK3Q8IV63 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VRK3Q8IV63 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.14□□□□□ -1.91
VRK3Q8IV63 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VRK3Q8IV63 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VRK3Q8IV63 MIR208A-201ENST00000362287 71 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 RNU5B-2P-201ENST00000363036 113 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 Y_RNA.286-201ENST00000364813 102 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 Y_RNA.291-201ENST00000364886 113 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 RNU6-493P-201ENST00000391321 108 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VRK3Q8IV63 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 RNU5A-5P-201ENST00000411054 116 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 EIF1AXP1-201ENST00000419267 435 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VRK3Q8IV63 RPS15AP7-201ENST00000439294 405 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 AC096638.1-201ENST00000444678 216 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 NDUFB4P10-201ENST00000452541 359 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 AC006026.2-201ENST00000457376 180 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 RN7SL601P-201ENST00000471221 293 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 RNU6-1183P-201ENST00000517054 60 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 AC016256.1-201ENST00000547971 354 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 LINC00933-203ENST00000559812 219 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 AL356157.2-201ENST00000605122 111 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 uc_338.25-201ENST00000613756 156 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.13□□□□□ -1.91
VRK3Q8IV63 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.13□□□□□ -1.91
VRK3Q8IV63 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
VRK3Q8IV63 AL353743.1-202ENST00000431724 1695 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 SNORD32A-201ENST00000364805 84 ntBASIC3.12□□□□□ -1.91
VRK3Q8IV63 Y_RNA.292-201ENST00000364904 97 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms